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发芽苦荞GABA-T基因克隆及序列分析
Cloning and analysis of the GABA-T gene from germinated tartary buckwheat
【摘要】 γ-氨基丁酸转氨酶(γ-aminobutyric acid transaminase GABA-T,EC2.6.1.19)是植物GABA转化途径中的第一步关键酶,与γ-氨基丁酸GABA的积累具有一定的关系.文中将苦荞进行发芽处理提取其总RNA,利用反转录聚合酶链式反应(reverse transcription polymerase chain reaction, RT-PCR)、巢氏PCR(nested PCR)与3′-cDNA末端快速扩增技术(rapid amplification of cDNA end, RACE)成功获得发芽苦荞GABA-T全长基因.序列分析表明,该基因序列全长1 556 bp,含有一个编码448个氨基酸的开放阅读框(open reading frame, ORF),其氨基酸序列与菠菜全长GABA-T氨基酸序列和欧洲栓皮栎树全长GABA-T氨基酸序列的相似度分别为87.05%和86.83%.基因序列的进化树分析结果表明,发芽苦荞GABA-T基因与甜菜、藜麦和菠菜来源相关基因的亲缘性最近.
【Abstract】 GABA transaminase GABA-T(EC 2.6.1.19) is the first key enzyme in the plant GABA transformation pathway, and is considered to have a certain relationship with the accumulation of GABA. In this study, the total RNA was extracted from germinated tartary buckwheat and the GABA-T gene was successfully cloned based on reverse transcription polymerase chain reaction(RT-PCR), nested PCR and rapid amplification of cDNA 3 ′-end(RACE) technologies. Sequence analysis showed that it was 1 556 bp in length and contained an open reading frame(ORF) encoding 448 amino acids. Its amino acid sequence has 87.05% and 86.83% similarity to the full-length GABA-T amino acid sequence of Spinacia oleracea and Eucalyptus urophylla, respectively. Phylogenetic tree analysis showed that it has the closest genetic relationship with sugar beet, buckwheat and spinach.
【Key words】 germinated tartary buckwheat; γ-aminobutyric acid transaminase; gene cloning; sequence analysis;
- 【文献出处】 江苏科技大学学报(自然科学版) ,Journal of Jiangsu University of Science and Technology(Natural Science Edition) , 编辑部邮箱 ,2022年04期
- 【分类号】S517
- 【下载频次】75