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HLA- A0201、A1101和A2402限制性HBV抗原肽的虚拟预测与实验鉴定

Virtual prediction and experimental identification of HBV antigenic peptides restricted by HLA- A0201, A1101 and A2402

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【作者】 赵晨金萧萧丁艳昂倩倩Odontuya Khaidav夏玲芝邱洁沈传来

【Author】 ZHAO Chen;JIN Xiaoxiao;DING Yan;ANG Qianqian;ODONTUYA Khaidav;XIA Lingzhi;QIU Jie;SHEN Chuanlai;Department of Pathogenic Biology and Immunology, Medical School, Southeast University;Detection Center for Autoimmune Diseases,Nanjing Kingmed Clinical Laboratory;Division of Infectious Diseases, the Second Hospital of Nanjing;

【通讯作者】 邱洁;沈传来;

【机构】 东南大学医学院病原生物学与免疫学系南京金域医学检验所自身免疫病检测中心南京市第二医院传染病科

【摘要】 目的:筛选和鉴定基因总频率>50%的3种人类白细胞抗原(HLA)(A0201、A1101和A2402)分子限制的乙型肝炎病毒(HBV)抗原T细胞表位肽。方法:利用6种在线T细胞表位肽预测数据库,针对乙肝病毒表面抗原、核心抗原、DNA多聚酶和X蛋白等4种抗原,虚拟筛选3种HLA-A分子限制的T细胞表位肽。从南京市第二医院检验科收集乙型肝炎住院患者的外周抗凝血,制备外周血单个核细胞,通过γ干扰素酶联免疫斑点法(IFN-γELISPOT)筛选出对任何一组混合多肽呈现特异T细胞反应的乙型肝炎患者;重新采集这些乙型肝炎患者的新鲜外周血,用IFN-γELISPOT法鉴定混合肽中单种抗原肽的免疫原性;并采用聚合酶链反应-测序分型法对这些乙型肝炎患者进行HLA-A等位基因分型。结果:经鉴定具有免疫原性的HLA-A0201分子限制性HBV表位肽8种,A1101限制性HBV表位肽6种,A2402限制性HBV表位肽7种。结论:本研究筛选鉴定了3种HLA-A分子限制的4种HBV抗原的21种T细胞表位肽,其中11种未见报道,而且HLA-A1101分子限制性表位肽的免疫原性明显弱于HLA-A0201和A2402分子限制性表位肽。

【Abstract】 Objective: To screen and identify the hepatitis B virus(HBV) antigenic T cell epitopes restricted by human leukocyte antigen(HLA)-A0201, A1101 and A2402 which have a total gene frequency of >50% in Chinese population. Methods: Six online data banks for T cell epitopes prediction were used to virtually screen the T cell epitopes derived from HBsAg, HBcAg, HBpol and HBx proteins and restricted by the three HLA-A molecules,respectively. Peripheral anticoagulation samples from HBV-infected in-patients were collected from the Department of Clinical Laboratory of Nanjing the Second Hospital, and peripheral blood mononuclear cells(PBMCs) were processed.Then the interferon-γ enzyme linked immunospot(IFN-γ-ELISPOT) assay was performed to screen out the patients who had the specific T cell responses to the cocktail of peptides. The fresh peripheral blood samples were collected again from these patients and the immunogenicity of each peptide was confirmed by the IFN-γ-ELISPOT assay. Meanwhile, HLA-A genotyping was carried out in these HBV-infected patients through polymerase chain reaction-sequencing-based typing(PCR-SBT) method. Results: The immunogenicity of eight epitopes restricted by HLA-A0201, six epitopes restricted by A1101, and seven epitopes restricted by A2402 were confirmed by functional experiment. Conclusion: Twenty-one T cell epitopes have been identified, which derived from four kinds of HBV proteins and restricted by three HLA-A molecules, respectively. Of them, eleven epitopes have not been reported before. Moreover, the immunogenicity of the epitopes restricted by HLA-A1101 is significantly weaker than that restricted by HLA-A0201 and A2402.

【基金】 江苏省科技支撑计划社会发展重点项目(BE2017714);南京市医学科技发展基金重点项目(ZKX18043)
  • 【文献出处】 东南大学学报(医学版) ,Journal of Southeast University(Medical Science Edition) , 编辑部邮箱 ,2019年06期
  • 【分类号】R512.62
  • 【下载频次】155
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