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Mmu-miR-107与Cacna2d1基因3’UTR结合位点的预测及验证

Predict and confirm the Cacna2d1 gene 3’UTR binding sites for mmu-miR-107

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【作者】 阮杰翁亚光赵炜熊兴东张春龙李江滨刘桂平黄池荣付思莹刘新光

【Author】 Jie Ruan;Yaguang Weng;Wei Zhao;Xingdong Xiong;Chunlong Zhang;Jiangbin Li;Guiping Liu;Chirong Huang;Siying Fu;Xinguang Liu;Institute of Aging Research,Guangdong Medical College;Institute of Laboratory Medicine,Guangdong Medical College;Institute of Biochemistry and Molecular Biology,Guangdong Medical College;Key Laboratory for Medical Molecular Diagnostics of Guangdong Province,Guangdong Medical College;College of Laboratory Medicine,Chongqing Medical University;

【机构】 广东医学院衰老研究所广东医学院医学检验学院广东医学院生物化学与分子生物学研究所广东医学院广东省分子诊断重点实验室重庆医科大学检验医学院

【摘要】 [目的]预测并验证mmu-miR-107与Cacna2d1基因3’UTR的结合位点。[方法]生物信息学预测miR-107与小鼠Cacna2d1基因3’UTR的结合位点,将包含3个靶位点的3’UTR片段克隆至荧光素酶载体p GL3中,构建野生型p GL3-Cacna2d1-WT3’UTR载体;并用重叠延伸PCR技术构建分别含有单个突变位点的载体Mut1200-207、Mut2361-367、Mut3902-908和同时含有3个突变结合位点的载体Mut4plus。将各重组质粒与miRNA mimics共转染C2C12细胞,检测荧光素酶活性。[结果]与共转染p GL3-Cacna2d1-WT 3’UTR和miR-NC组相比,共转染p GL3-Cacna2d1-WT 3’UTR和mimics-miR-107组荧光素酶活性显著下降(P<0.01);与共转染对应的突变体和miR-NC组相比,转染突变体Mut2361-367/Mut3902-908和mimics-miR-107组的荧光素酶活性均下降(P<0.05);转染突变体Mut1200-2077/Mut4plus和mimics-miR-107组的荧光素酶活性下降不明显(P>0.05)。[结论]Cacna2d1基因3’UTR段双荧光素酶基因报告载体及突变体构建成功,初步证实miR-107与Cacna2d1 3’UTR的200-207位点结合。

【Abstract】 [Objective]To predict and confirm the Cacna2d1 gene 3’ UTR binding sites for mmu-miR-107. [Methods]Bio-information assay revealed that the 3’UTR of Cacna2d1 harbors three putative binding sites for miR-107. Thus,the 3’ UTR of Cacna2d1 gene was amplified by PCR,and inserted into p GL3 Luciferase reporter vector(made the wild-type plasmid p GL3-Cacna2d1-WT 3’UTR). Then three mutant plasmids containing single binding site(Mut1200-207,Mut2361-367 or Mut3902-908) and a mutant plasmid containing all the three binding sites(Mut4plus) were made by overlap extension PCR. Both recombinant plasmids and mimics NC(or miR-107) were transfected into C2C12 cells,and the activity of luciferas was detected by Luciferase Reporter Assay. [Results]Compared with the C2C12 cells co-transfected with p GL3-Cacna2d1-WT 3’ UTR and miR-negetive control,the luciferase activity of C2C12 cells transfected with p GL3-Cacna2d1-WT 3’UTR and mimics-miR-107 was decreased(P < 0. 01); Compared with the C2C12 cells co-transfected with mutant p GL3-Cacna2d1-WT 3’ UTR and miR-negetive control,the luciferase activity of C2C12 cells co-transfected with Mut2361-367 and mimics-miR-107,co-transfected with Mut3902-908 and mimics-miR-107 were decreased(P < 0. 05); the luciferase activity of C2C12 cells co-transfected with Mut1200-207 and mimics-miR-107,co-transfected with Mut4 plusand mimics-miR-107 were not obviously decreased(P > 0. 05). [Conclusion]The luciferase reporter plasmids containing wild-type 3’ UTR of Cacna2d1 and mutant 3’UTR of Cacna2d1 were constructed successfully,the 3’UTR of Cacna2d1 harbors the binding sites 200-207 for miR-107.

【关键词】 Cacna2d1miR-1073’非编码区结合位点
【Key words】 Cacna2d1miRNA-1073’UTRbinding sites
【基金】 国家自然科学基金项目(“基于早老小鼠模型的衰老相关microRNAs的功能研究”,No.81170327);广东省医学科研基金项目(“MicroRNA-107参与P53-P21-Rb信号通路调节细胞衰老的分子机制研究”,No.A2014470);东莞市医疗卫生一般项目(“MicroRNA-107对细胞衰老的调控作用及分子机制研究”,No.201410515200159);广东医学院科研基金项目(No.XK1412,M2010007);广东医学院大学生创新创业训练计划项目(No.201310571009);广东医学院建博科技创新团队项目(No.STIF201102)资助
  • 【文献出处】 生物技术 ,Biotechnology , 编辑部邮箱 ,2015年01期
  • 【分类号】R346
  • 【被引频次】1
  • 【下载频次】236
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