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新疆早熟棉品种SSR分子标记体系的建立

Optimization of Amplification Reaction System and Construction of DNA Fingerprinting of Local Upland Cotton Cultivars in Xinjiang

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【作者】 薛艳; 李保成; 张新宇; 沙红; 孙杰;

【Author】 XUE Yan1,LI Baocheng2,ZHANG Xinyu1,SHA Hong3,SUN Jie1(1 College of Agriculture/The Key Laboratory of Oasis Eco-Agriculture of Xinjiang Production and Construction Group,Shihezi University,Shihezi 832003,China;2 Xinjiang Academy of Farmland Reclamation,Shihezi 832003,China;3 Institute of Industrial Crops,Xinjiang Academy of Agricultural Science,Urumqi 83000,China)

【机构】 石河子大学农学院/新疆兵团绿洲生态农业重点实验室; 新疆农垦科学院; 新疆农业科学院经济作物研究所;

【摘要】 为探索适宜新疆早熟棉的SSR-PCR反应体系,采用L9(34)正交实验设计,研究了SSR-PCR反应体系的主要成分对扩增结果的影响。结果表明,棉花SSR-PCR最适反应体系为:在10μL的反应体系中,Taq DNA聚合酶用量为0.1 U、dNTP浓度0.2 mmol/L、引物浓度0.4μmol/L、Mg2+浓度2.5 mmol/L和模板DNA 20 ng;在此基础上,从2300对SSR引物中筛选出多态性高的引物52条,分别构建了新疆已经审定的42个早熟棉品种的DNA指纹图谱。该研究为早熟棉品种鉴定、遗传多样性分析,分子标记辅助育种和种子质量综合评价等奠定了基础。

【Abstract】 In this study,SSR-PCR reaction conditions of short-season upland cotton in Xinjiang were optimized.The factors that affect SSR results of upland cotton were studied by L9(34) orthogonal design.The results showed that 0.1U Taq Polymerase,0.2 mmol/L dNTP,0.4 μmol/L primer,2.5 mmol/L Mg2+ and 20 ng template DNA in 10 μL SSR reaction system might be the best combination.52 pairs of SSR primers were screened out from 2300 pairs.The DNA fingerprint for 42 local cultivars of upland cotton in Xinjiang was successfully constructed by SSR-PCR amplification.This study lays a firm foundation for cultivars identification,genetic diversity evaluation and marker-assisted selection breeding and seed quality assessment of short-season upland cotton cultivars in Xinjiang.

【关键词】 陆地棉; 早熟; SSR; 体系优化;
【Key words】 upland cotton; earliness; SSR; system optimization;
【基金】 国家科技支撑计划项目(2007BAD44B07)
  • 【文献出处】 石河子大学学报(自然科学版) ,Journal of Shihezi University(Natural Science) , 编辑部邮箱 ,2011年01期
  • 【分类号】S562
  • 【被引频次】7
  • 【下载频次】137
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