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粳稻发芽期耐碱性的QTL检测

Detection of QTL for Alkali Tolerance at the Germination Stage in japonica Rice

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【作者】 祁栋灵李丁鲁杨春刚李明哲曹桂兰张俊国周庆阳徐锡哲张三元韩龙植

【Author】 QI Dong-ling1,2,LEE Jung-ro3,YANG Chun-gang4,LEE Myung-chul3,CAO Gui-lan1,ZHANG Jun-guo4,ZHOU Qing-yang5,SUH Seok-cheol3,ZHANG San-yuan4,,HAN Long-zhi1,(1Institute of Crop Science,Chinese Academy of Agricultural Sciences/The National Key Facility for Crop Gene Resources and Genetic Improvement,NFCRI/Key Laboratory of Crop Germplasm Resources and Biotechnology,Ministry of Agriculture,Beijing 100081,China;2Institute of Rubber Research,Chinese Academy of Tropical Agricultural Sciences/State Engineering and Technology Research Center for Key Tropical Crops/State Key Laboratory Breeding Base of Cultivation & Physiology for Tropical Crops,Hainan Provincial Key Laboratory for Tropical Crops Physiology,Danzhou 571737,China;3National Academy of Agricultural Sciences,RDA,Suwon 441-707,Korea;4Institute of Rice Research,Jilin Academy of Agricultural Sciences,Gongzhuling 136100,China;5Horticultural Department,Sichuan Agricultural University,Ya′an 625014,China)

【机构】 中国农业科学院作物科学研究所/国家农作物基因资源与基因改良重大科学工程/农业部作物种质资源与生物技术重点开放实验室中国热带农业科学院橡胶研究所/国家重要热带作物工程技术研究中心/省部共建国家重点实验室培育基地-海南省热带作物栽培生理学重点实验室韩国农村振兴厅国立农业科学院吉林省农业科学院水稻研究所四川农业大学园艺系

【摘要】 以粳粳交高产106/长白9号的200个F2:3株系为作图群体,在0.15%Na2CO3溶液碱胁迫下,进行了水稻发芽率及其相对碱害率的鉴定评价,并以SSR标记构建的分子连锁图谱为基础,对水稻发芽率及其相对碱害率进行了数量性状基因座(QTL)检测。结果表明,在F3株系群中水稻发芽率及其相对碱害率均呈单峰接近正态的连续分布。共检测到碱胁迫下与水稻发芽率相关的QTL 7个,对表型变异的贡献率范围为4.05%~12.61%,其中位于第6染色体RM225-RM204区间的qGC-6和位于第9染色体RM219-RM3700区间的qGC-9对表型变异的贡献率分别为12.61%和10.85%。共检测到与水稻发芽率相对碱害率相关的QTL 6个,对表型变异的贡献率为4.82%~28.07%,其中位于第2染色体RM29-RM221区间的qRGC-2、位于第6染色体RM225-RM204区间的qRGC-6-1、位于第9染色体RM219-RM3700区间的qRGC-9和位于第12染色体RM260-RM3226区间的qRGC-12对表型变异的贡献率较大,分别为28.07%、15.35%、15.61%和18.91%,为主效QTL,但其相应的区间距离均较远,需要进一步深入研究。所检测的QTL增效等位基因主要表现为部分显性和超显性。

【Abstract】 The quantitative trait loci(QTLs) for germination capacity and relative alkali damage rate for germination capacity in rice under alkali stress(0.15% Na2CO3 solution) were identified by using an F2:3 population,which included 200 individuals and lines derived from a cross between two japonica cultivars Gaochan 106 and Changbai 9 with microsatellite markers.The germination capacity and its relative alkali damage rate showed a continuous and near normal distribution in F3 lines.Seven QTLs associated with the germination capacity under alkali stress were detected,which explained 4.05% to 12.61% of the observed phenotypic variances.qGC-6 and qGC-9 were located in RM225-RM204 and RM219-RM3700,respectively,which accounted for 12.61% and 10.85% of the observed phenotypic variation,respectively.Six QTLs correlated with relative alkali damage rate for germination capacity under alkali stress were detected.qRGC-2,qRGC-6-1,qRGC-9,and qRGC-12 were major QTLs located in RM29-RM221,RM225-RM204,RM219-RM3700,and RM260-RM3226,respectively,which explained 28.07%,15.35%,15.61% and 18.91% of the observed phenotypic variation,respectively.Given the long distances between the markers further research should be conducted.Most of the alleles were partially dominant or overdominant.

【基金】 国家科技支撑计划资助项目(2006BAD13B01);国家973计划资助项目(2004CB117201);中韩科技合作项目(2006-2009)
  • 【文献出处】 中国水稻科学 ,Chinese Journal of Rice Science , 编辑部邮箱 ,2009年06期
  • 【分类号】Q943.2
  • 【被引频次】18
  • 【下载频次】190
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