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猪轮状病毒JL94株VP6基因克隆及同源性比较

Cloning of VP6 gene from porcine Rotavirus JL94 isolate and homologous comparison with reference strains

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【作者】 陈淑红李一经师东方魏晓军包海鹰

【Author】 CHEN Shu-hong 1,LI Yi-jing 1,SHI Dong-fang 1,WEI Xiao-jun 2,BAO Hai-ying 2 (College of Veterinary Medicine,Northeast Agricultural University,Harbin,150030,China)

【机构】 东北农业大学动物医学院内蒙古通辽市科尔沁区畜牧局内蒙古通辽市科尔沁区畜牧局 黑龙江哈尔滨150030黑龙江哈尔滨150030内蒙古通辽028000内蒙古通辽028000

【摘要】 通过反转录—聚合酶链反应 (RT— PCR)扩增了猪轮状病毒国内地方分离株 JL 94的 VP6基因 c DNA片段。将其插入克隆载体质粒 p MD18- T的 Eco RV酶切位点处 ,构建了重组质粒 p MD18- T— VP6。对克隆的 VP6基因进行序列测定 ,测序结果显示 VP基因全长 135 6 bp,并与猪 A群轮状病毒 OSU(亚组 )、Gottfried(亚组 )的 VP6进行同源性比较 ,结果显示 ,核苷酸序列同源性分别为 86 .85 %、82 .4 1% ,氨基酸序列同源性分别为 97.4 8%、93.2 0 % ,结果表明 JL 94分离株与 OSU株在基因型上更为接近

【Abstract】 The porcine rotavirus JL94 isolate was propagated in MA104 cells and its dsRNA was extracted.Its cDNA segments of complete gene 6 were obtaied from RT-PCR and cloned into pMD18-Tvector and sequenced.The results of sequencing showed that JL94 complete gene 6 cDNA is 1356bp.The sequence was analyzed homologously in comparison with the VP6 nucleotide sequences of two reference porcine rotavirus OSU(subgroup Ⅰ)and Gottfried(subgroup Ⅱ).Nucleotide sequence comparison indicated that JL94 shared 86.85% and 82.41% identities with OSU and Gottfried respectively.The deduced animo acid sequences were 97.48% and 93.20% correspondingly.The result showed that JL94 isolate is more similar to OSU in gene type.

【关键词】 轮状病毒VP6基因克隆同源性
【Key words】 porcinerotavirusVP6 gengcloninghomology
【基金】 黑龙江省“十五”攻关课题资助项目 (GC0 1B5 10 )
  • 【文献出处】 中国兽医杂志 ,Chinese Journal of Veterinary Medicine , 编辑部邮箱 ,2003年09期
  • 【分类号】S852.65
  • 【被引频次】3
  • 【下载频次】147
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