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克拉玛依地区HBV基因分型及进化分析

Genotyping of hepititis B virus and phylogenetic analysis in Kelamayi

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【作者】 王复元吴秀娟张大军杜绍财张瑞东传玲

【Author】 Wang Fu-Yuan1,Wu Xiu-Juan1,Zhang Da-Jun1,Du Shao-cai2,Zhang Rui2,Dong Chuan-Ling1(1.Kelamayi Center for Disease Control and Prevention,Kelamayi 834000,China;2.Department of Liver Diseases of Beijing University,Beijing 100004,China)

【机构】 新疆克拉玛依市疾病预防控制中心北京大学肝病研究所新疆克拉玛依市疾病预防控制中心 新疆克拉玛依834000新疆克拉玛依834000北京100004

【摘要】 目的:研究克拉玛依地区乙肝病毒(HBV)的基因分型,并且进行进化分析。方法:利用限制性片段多态性分析的方法对272例慢性乙型肝炎患者血清进行基因分型,采用限制性内切酶MboI、EarI酶切扩增产物,以A、B、C、D基因参照品作为对照,12例扩增产物进行测序证实其基因型。结果:272例样品有241例成功分型。C型44.8%,B型36.9%,D型4.2%,B/C型10.8%,B/D型3.3%。少数民族C型40.4%,B型30.8%,D型9.6%,B/C型11.5%,B/D型7.7%,未检测到A型。12例测序结果与39例GenBank中已发表的B、C、D型的同源性在97.8%~98.7%,96.9%~99.3%,97.5%~99.0%。结论:克拉玛依地区HBV基因型主要是C型和B型,其次是D型和混合型,未见A型。进化树分析图显示12例B、C、D型毒株与GenBank序列毒株分别属于同一分支。克拉玛依地区2例D型与新疆哈密地区D型进化距离最近。

【Abstract】 Objective:To study the distribution of HBV virus genotypes in Kelamayi area.Methods:The sera from 272 HBV-DNA positive patients were genotyped by the PCR-RFLP method set up by our laboratory and the restriction enzyme method.Results:A total of 241 samples could be genotyped by PCR-RFLP method,of the 241 patients,44.8% were of genotype C,36.9% of genotype B,4.2% of genotype D,14.1% of mixed genotype.And in minority 40.4% were genotype C,30.8% of genotype B,9.6% of genotype D.Genotype A was not examined.Homology of 12 samples was the same as 39 samples in Genbank.Conclusion:Genotypes C,Genotypes B,Genotypes D and Genotypes B+C exist in Kelamayi area.Genotypes C and Genotypes B is the major genotype.Outcome of Phylogenetic analysis is accorded with samples in Genbank.Phylogenetic distance of 2 samples of gentypes D in this area is near by with HaMi in Xinjiang.

【关键词】 乙肝病毒基因型限制性片段进化
【Key words】 Hepatitis B virusGenotypeRFLPPhylogeny
  • 【文献出处】 中国卫生检验杂志 ,Chinese Journal of Health Laboratory Technology , 编辑部邮箱 ,2007年03期
  • 【分类号】R512.62
  • 【被引频次】11
  • 【下载频次】99
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