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水稻细胞质铜锌超氧化物歧化酶基因的序列和表达分析

Sequence and Expression Analysis of Cytoplasmic Copper/zinc Superoxide Dismutase Gene in Rice

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【作者】 王峰王宏斌王金发

【Author】 WANG Feng1,2, WANG Hong-bin1, WANG Jin-fa1* (1. The State Key Laboratory of Biocontrol and the Key Laboratory of Gene Engineering of Ministry of Education, School of Life Science, Sun Yat-sen University, Guangzhou 510275, China; 2. Institute of Genomic Medicine, College of Pharmacy, Jinan University, Guangzhou 510632, China)

【机构】 中山大学有害生物控制与资源利用国家重点实验室、基因工程教育部重点实验室生命科学学院中山大学有害生物控制与资源利用国家重点实验室、基因工程教育部重点实验室生命科学学院 广州510275 暨南大学药学院基因组药物研究所广州510632广州510275

【摘要】 以水稻(Oryza sativa)品种Cpslo17幼穗为材料,通过RT-PCR克隆了长度为698bp的编码水稻细胞质铜锌超氧化物歧化酶基因(OsCu/Zn-SOD)。序列分析表明其覆盖基因完整编码框,编码由152个氨基酸组成的蛋白,它与玉米(Zea maize)Cu/Zn-SOD基因序列的相似率为88%。TargetP和ChloroP预测编码蛋白N端无信号肽序列,且此编码区段有8个外显子和7个内含子。利用Swiss-Model站点预测OsCu/Zn-SOD三维结构,并分析其铜锌离子结合位点的结构。RT-PCR结果表明OsCu/Zn-SOD在水稻不同品种均有表达,但表达量存在差异,OsCu/Zn-SOD在Cpslo17的分裂旺盛的幼嫩组织如幼穗、开花期花序和未成熟种子中表达量较高,而在叶片中表达量相对较低,在愈伤组织中表达微弱。

【Abstract】 The 698 bp cytoplasmic copper/zinc-superoxide dismutase gene (OsCu/Zn-SOD) was cloned by RT-PCR from young panicles of rice Cpslo17, a wide-compatible rice cultivar (Oryza sativa). DNA sequence analysis indicated that the gene consisted of a full-open reading frame and encoded a protein of 152 amino acid residues. The nucleatide sequence of OsCu/Zn-SOD shares 88% identity to maize Cu/Zn-SOD. No signal peptide was predicted by TargetP and ChloroP. Further analysis of encoding segment of OsCu/Zn-SOD revealed that it contained 8 exons and 7 introns. The putative three-dimensional structure of OsCu/Zn-SOD was predicted by the Swiss-Model server and Cu2+ and Zn2+ binding sites of OsCu/Zn-SOD were analyzed. RT-PCR results showed differential expression of OsCu/Zn-SOD in leaves of both japnica and indica rice. OsCu/Zn-SOD was expressed highly in panicles during young ear and the flowering stages or in immature seeds, however less in leaves and faintly in callus.

【基金】 科技部植物转基因重大专项资助项目(J00-A-009);国家自然科学基金项目(30370809)资助
  • 【文献出处】 热带亚热带植物学报 ,Journal of Tropical and Subtropical Botany , 编辑部邮箱 ,2007年02期
  • 【分类号】S511
  • 【被引频次】27
  • 【下载频次】375
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