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应用微卫星标记评估我国水稻主栽品种的一致性

Assessment of Uniformity of Major Rice Varieties in China Using Microsatellite Markers

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【作者】 应杰政施勇烽庄杰云薛庆中

【Author】 YING Jie-zheng~(1,2),SHI Yong-feng~(2),ZHUANG Jie-yun~(2),XUE Qing-zhong~(1,*)(~(1)Department of Agronomy,College of Agriculture and Biotechnology,Zhejiang University,Hangzhou 310029,China;~(2) Chinese National Center for Rice Improvement/State Key Laboratory of Rice Biology,China National Rice Research Institute,Hangzhou 310006,China;)

【机构】 浙江大学农业与生物技术学院农学系中国水稻研究所国家水稻改良中心/水稻生物学国家重点实验室浙江大学农业与生物技术学院农学系 浙江杭州310029浙江杭州310006浙江杭州310029

【摘要】 为较准确地评估我国水稻主栽品种的一致性,挑选5个微卫星标记,对41个有2~7个来源的水稻品种进行了微卫星标记检测。结果表明,18个(43.90%)品种存在同一品种名称不同来源间的差异。进一步选择11个代表性水稻品种或杂交稻组合作较大样本分析(50个单株),它们在5个微卫星标记上的不一致率为0.0%~10.0%,平均为1.67%,每个微卫星标记的异质率变化幅度为0.36%~5.45%。11个品种中有6个(54.55%)在所有位点上完全一致,不一致率通常都不超过5%。因此,在构建水稻品种微卫星数据库时,必须慎重选择取样来源。当鉴别特定材料时,则应相应增加标记数。

【Abstract】 To have a better assessment of the within-variation variation of the major rice varieties in China,41 varieties from two to seven sources were assayed with a set of five well-chosen microsatellite markers,18 varieties(43.90%) of which showed heterogeneity among the different sources with the same name at 1 to 4 loci.Eleven varieties were further selected and analyzed with larger samples containing 50 individuals per variety.Non-uniformity of the varieties varies from 0.0-10.0% with an overall average of 1.67% on average five SSR loci,and the heterogeneity of the markers ranges from 0.36% to 5.45%.It also showed that 6 of the 11 typical rice varieties were completely uniform,and the non-uniformities within varieties across all loci were lower than 5%.Therefore,it is advisable that the sources of the materials should be selected carefully in constructing a microsatellite database,and that the number of markers should be correspondingly increased when identifying some specific materials.

【基金】 中央级科研院所科技基础性工作专项资助项目(2003DEB5J046);农业部农业标准制定和修订项目(06249);浙江省重大项目(200524007);浙江省重点项目(2003C22007)
  • 【文献出处】 中国水稻科学 ,Chinese Journal of Rice Science , 编辑部邮箱 ,2006年04期
  • 【分类号】S511
  • 【被引频次】15
  • 【下载频次】129
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