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三维原子场作用全息矢量用于二氢叶酸还原酶抑制剂及苦味二肽QSAR研究

Study on Quantitative Structure-Activity Relationship by 3D Holographic Vector of Atomic Interaction Field

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【作者】 梁桂兆梅虎周鹏周原李志良

【Author】 LIANG, Gui-Zhao1, 2 MEI, Hu1, 2 ZHOU, Peng1 ZHOU, Yuan1, 2 LI, Zhi-Liang1, 2*(1College of Chemistry and Chemical Engineering; 2Key Laboratory of Biomechanics and Tissue Engineering, Chongqing University, Chongqing 400030, P. R. China)

【机构】 重庆大学化学化工学院重庆大学化学化工学院 重庆大学生物力学与组织工程教育部重点实验室 重庆400030重庆大学生物力学与组织工程教育部重点实验室 重庆400030

【摘要】 将三维原子场作用全息矢量用于表征68个二氢叶酸还原酶抑制剂和48个苦味二肽结构,分别以多元线性回归和偏最小二乘建模,取得优良结果.对前者建模得复相关系数Rm2m=0.893,交互检验相关系数RC2V=0.853,对后者建模得Rm2m=0.936,RC2V=0.849.结果表明3D-HoVAIF能够较好表征两类分子结构,具有物化意义明确及结果易解释特点,值得进一步应用推广.

【Abstract】 A novel method based on three-dimensional holographic vector of atomic interaction field (3D-HoVAIF) was employed to express 3D structures of 68 dihydrofolate reductase(DHFR) inhibitors and 48 bitter tasting thresholds(BTT). Better model was developed based on multiple linear regression (MLR) through a stepwise manner for DHFR and genetic arithmetic-partial least square for BTT, and the following results were obtained: the multiple correlation coefficient (R2 mm) of 0.893 and 0.936, the cross validated R2cv of 0.853 and 0.849 by the leave-one-out procedure, respectively.Satisfactory results showed that information related to biological activities of DHFR and BTT can preferably be expressed by 3D-HoVAIF with definite physical and chemical meaning, easy interpretation, and well understanding, which may become a useful structural expression technique to study quantitative structure-activity relationships (QSAR) for various bioactive substances.

【基金】 霍英东基金[98-7-6];国家春晖计划教育部启动基金[99-1-4/38];重庆大学研究生创新实践基金[03-5-6,06-01-A]资助项目
  • 【文献出处】 物理化学学报 ,Acta Physico-Chimica Sinica , 编辑部邮箱 ,2006年03期
  • 【分类号】O621.2
  • 【被引频次】8
  • 【下载频次】171
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