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基于小波核支持向量机的蛋白质二级结构预测
Protein secondary structure prediction based on WSVM
【摘要】 提出一种基于小波核支持向量机分类模型,将其用于SARS蛋白质二级结构预测.实验表明,该模型与其他同类方法相比,提高蛋白质二级结构预测的准确度达到1%~2%.
【Abstract】 A classification model based on the wavelet kernel function of support vector machine(SVM) was proposed to improve the accuracy of protein secondary structure prediction.The model was applied to predict protein secondary structure of SRAS.It shows good abilities of classification and generalization by making use of the characters of wavelet and SVM.Simulational results show that the algorithm has better performance than other comparable ones and that it can improve the accuracy of predicting secondary structure of SARS by a 1%~2% increase.
【关键词】 小波;
核函数;
支持向量机;
蛋白质二级结构预测;
生物信息学;
【Key words】 wavelet; kernel function; support vector machine; protein secondary structure; bioinformatics;
【Key words】 wavelet; kernel function; support vector machine; protein secondary structure; bioinformatics;
【基金】 深圳市科技计划资助项目(200333)
- 【文献出处】 深圳大学学报 ,Shenzhen University Journal , 编辑部邮箱 ,2006年02期
- 【分类号】Q51-3
- 【被引频次】7
- 【下载频次】331