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荠菜LEAFY同源基因的克隆与进化分析

Cloning and Evolutionary Analysis of Homologous Sequences of LEAFY Gene in Capsella bursa-pastoris(Cruciferae)

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【作者】 周贤龙王小兰王武源葛学军

【Author】 ZHOU Xian-long1,5,WANG Xiao-lan2,WANG Wu-yuan3,GE Xue-jun4*(1.South China Botanical Garden,the Chinese Academy of Sciences,Guangzhou 510650,China;2.Centre for Functional Genomics and Microarray,Guangzhou University,Guangzhou 510405,China;3.Jiangxi Agriculture Engineering Vocational College,Zhangshu 331200,China;4.School of Life Sciences,Sun Yat-Sen University,Guangzhou 510275,China;5.Graduate University of Chinese Academy of Sciences,Beijing 100039,China)

【机构】 中国科学院华南植物园广州大学功能基因与芯片研究中心江西农业工程职业学院中山大学生命科学学院 广州510650中国科学院研究生院北京100039广州510405樟树331200广州510275

【摘要】 LEAFY同源基因是高等植物花的分生组织分化的重要调节基因。根据已发表的LEAFY同源基因序列保守区设计引物,以荠菜(Capsellabursa-pastoris(L.)Medic.)基因组DNA序列为模板,克隆了一条长2866bp的LEAFY同源基因。序列分析表明,该基因含有3个外显子和2个内含子,外显子编码424个氨基酸组成的多肽。其单个外显子核苷酸序列与拟南芥(Arabidopsisthaliana)LEAFY基因同源性在90%以上,氨基酸序列同源性为86%,而与琴叶拟南芥(Ara-bidopsislyrata)的氨基酸序列同源性高达90%。不同植物物种的LEAFY同源氨基酸序列在C端高度保守,而N端则有较大程度的变异。3个外显子进化速率不同可能是由于所受选择压力不同所致。存在于荠菜CapLFY基因346位上的精氨酸突变可能是造成荠菜两种生态型花期不同的原因。

【Abstract】 LEAFY is an important regulator of floral meristems genes in higher plants.To investigate its origin and evolution,a LEAFY homologs with length of 2 866 bp was cloned from Capsella bursa-pastoris genome using the conserved primers from Arabidopsis thaliana LEAFY gene.Sequence analysis indicated three exons with the length of 457 bp,407 bp and 411 bp.These exons encoded a protein of 424 amino acids.The single exon was more than 90% homologous to A.thaliana LEAFY gene,and the amino acid homology was 86%.When compared to Arabidopsis lyrata LEAFY gene,there was 93 nucleotide substitution in the exons of C.bursa-pastoris,and 74.7% of these mutations located at the third position of codon,the amino acid homology reached 90%.Among the three exons,Ds/Dn ratio was 1.9,2.3 and 6.0.Homologous comparison indicated that the C-terminal amino acids were highly conserved among different plant species while the great variation existed in N-terminal.In addition,the Arg mutation located at 346 in CapLFY gene was speculated to be one of main reasons that caused the ecotypes with different flowering time in C.bursa-pastoris.

【关键词】 荠菜LEAFY基因克隆进化分析
【Key words】 Capsella bursa-pastorisLEAFY geneCloningEvolutionary analysis
【基金】 广东省自然科学基金项目(05006754);广东省自然科学基金博士启动项目(04300465)
  • 【文献出处】 热带亚热带植物学报 ,Journal of Tropical and Subtropical Botany , 编辑部邮箱 ,2006年02期
  • 【分类号】Q943
  • 【被引频次】9
  • 【下载频次】322
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