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鉴定定量PCR不同引物对的扩增效率

Amplification efficiency test for primers in real-time PCR reactions

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【作者】 张静静马长艳孙玉洁

【Author】 ZHANG Jing-jing, MA Chang-yan, SUN Yu-jie* (Key Laboratory of Human Functional Genomics,NJMU,Nanjing 210029,China)

【机构】 南京医科大学江苏省人类功能基因组学重点实验室南京医科大学江苏省人类功能基因组学重点实验室 江苏南京210029江苏南京210029

【摘要】 目的:采用载体构建及荧光定量PCR的方法比较BCL2等位基因不同部位PCR引物在定量分析中的扩增效率,判断其用于不同等位基因转录活性分析的可靠性。方法:用PCR扩增包含定量PCR目的片段的序列,然后将扩增产物分别插入pGEM-TEasy载体中,构建TA3重组载体,再以TA3载体为模板,采用荧光定量PCR方法比较引物对之间扩增效率。结果:定量PCR结果显示引物对之间扩增效率无明显差异。结论:所检测的PCR引物对之间的扩增效率一致,可用于比较分析mbr+/mbr-Nalm-6杂合子细胞系中两个等位基因表达活性。

【Abstract】 Objective: To investigate the amplification efficiency of primers on different sites of BCL2 alleles in real-time PCR reactions and the reliability of these primers in analysis of transcription activity of different alleles with vector construction and real-time PCR. Methods: Fragments containing all amplicons from real-time PCR reactions were amplified by PCR and then inserted into the pGEM-T Easy vector to construct TA3 vector. The real-time PCR analysis was performed with TA3 plasmid as templates for testing the amplification efficiency of primers. Results: Real-time PCR showed no significant difference in the amplification efficiency for the of primers. Conclusion: Amplification efficiency of primers in real-time PCR reactions is identical. These primers can be used for quantity analysis of transcription activity of two BCL2 alleles in mbr+/mbr-Nalm-6 heterozygous cell line.

【关键词】 PCR引物扩增效率
【Key words】 real-time PCRprimeramplification efficiency
【基金】 国家自然科学基金资助项目(30371592)
  • 【文献出处】 南京医科大学学报(自然科学版) ,Acta Universitatis Medicinalis Nanjing(Natural Science) , 编辑部邮箱 ,2006年08期
  • 【分类号】R346
  • 【被引频次】6
  • 【下载频次】1169
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