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EBV-LMP1C端RNA的体外转录合成及其靶脱氧核酶的初步筛选

EBV-LMP1 carboxy region RNA synthesis via transcription in vitro and initial selection of targeted DNAzyme

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【作者】 杨玉成王袆琴钱迪何芸黄江菊洪苏玲

【Author】 YANG Yu-cheng,WANG Yi-qin,QIAN Di,HE Yun,HUANG Jiang-ju,HONG Su-ling(Department of Otolaryngology,The First Affiliated Hospital,Chongqing University of Medical Sciences,Chongqing 400016,China)

【机构】 重庆医科大学附属第一医院耳鼻咽喉科重庆医科大学附属第一医院耳鼻咽喉科 重庆400016重庆400016

【摘要】 目的探讨用体外转录方法制备EBV-LMP1C端RNA并用该RNA对其靶脱氧核酶进行初步筛选。方法用巢式PCR方法从绒猴淋巴细胞系B95-8细胞中扩增EBV-LMP1exonc,重组入pGEM-11zf载体,并用T7RNA聚合酶对其进行体外转录制备EBV-LMP1C端RNA。根据该RNA的一、二级结构设计合成3种靶向10~23脱氧核酶,据体外剪切效率筛选高效特异的靶向脱氧核酶。结果成功地构建含EBV-LMP1exonc基因的重组质粒,用体外转录方法用1μg质粒转录出40.25μg高纯度的EBV-LMP1C端RNA,有1种脱氧核酶DZ1对该RNA体外剪切效率达89%。结论用T7RNA聚合酶体外转录方法成功制备了高纯度的EBV-LMP1C端RNA,经体外剪切筛选出高效特异的1种脱氧核酶,为进一步研究奠定了基础。

【Abstract】 Objective To synthesize highly pure EBV-LMP1 carboxy region RNA by in vitro transcription and select its targeted active DNAzyme.Methods EBV-LMP1 exon c gene was amplified by nest PCR from the B95-8 cell genomic DNA and cloned into plasmid pGEM-11zf.The cloned DNA sequence was transcribed in vitro by T7-RNA polymerase.Three targeted 10-23 DNAzymes were designed and synthesized.The highly active and specific DNAzymes were evaluated by in vitro cleavage reaction.Results EBV-LMP1 exon c gene recombinant plasmid was successfully constructed and 40.25 μg EBV-LMP1 carboxy region RNA was produced via transcription in vitro from 1.0 μg lined recombinant plasmid.The cleavage ratio of active DNAzyme DZ1 was 89%.Conclusion Highly pure EBV-LMP1 carboxy region RNA was synthesized successfully by in vitro transcription.One active targeted DNAzyme was selected by in vitro cleavage reaction,paving the way for further research.

【基金】 重庆市卫生局资助重点项目(2003)~~
  • 【文献出处】 第三军医大学学报 ,Acta Academiae Medicinae Militaris Tertiae , 编辑部邮箱 ,2006年24期
  • 【分类号】Q789
  • 【被引频次】8
  • 【下载频次】97
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