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巴西固氮螺菌Yu62glnZ基因及其相邻基因的克隆和序列分析
Cloning and Sequencing of glnZ and the other Genes Clustered Around glnZ from Azospirillum brasilense Yu62
【摘要】 通过原位杂交从巴西固氮螺菌(Azospirillum brasilense)Yu62的基因组文库中获得glnZ基因的阳性克隆,对该阳性克隆进行亚克隆和序列分析,结果表明 glnZ基因位于 3.7 kb的 SaLI片段上。glnZ基因编码区长 336 bP,编码的产物是 Pz蛋白,由112个氨基酸组成,分子量为1.12kD。用Blastax软件对Pz蛋白的氨基酸序列在GenBank数据库中进行同源比较,结果表明Pz蛋白与其它几种固氮菌及大肠杆菌的GlnK蛋白的同源性(identities)达66%以上;与PⅡ蛋白的同源性达64%以上。 glnZ基因上游是部分ubiH-like基因,与E.coli ubiH基因(编码辅酶Q, ubiquinone) N-端有31%的同源性(identity)和50%相似性(similarity);glnZ基因下游是 aat-like基因,与 E. coli和 Bacillus subtilis aat基因(编码天冬氨酸氨基转移酶,aspartate aminotransferase)有同源性和相似性都为26%和42%;aat-like基因下游是部分ftsK-like基因,与E.coli ftsK?
【Abstract】 The glnZ gene of A. brasilense was determined in a 3.7 kb SalI fragment, and ubiH-like, aat-like and ftsK-like genes were clustered around glnZ. A partial ubiH-like gene (required for ubiquinone synthesis) precedes glnZ and is transcribed from the opposite strand. The ubiH-like gene of A. brasilense has 31% identitiy and 50% similarity with ubiH gene of E. coli. The aat (aspartate aminotransferase)-like and ftsK (involved in peptidoglycan synthesis during cell septation ) -like genes were found clustered downstream of glnZ. The aat-like gene of A. brasilense has 26% identity and 42% similarity with aat gene of E. coli. The ftsK-like gene of A. brasilense has 42% identity and 56% similarity with ftsK gene of E. coli. The glnZ gene encodes 112 amino acid-long Pz polypeptide, maping between positions 1057~1395bp. The amino acid sequence of Pz from A. brasilense is more than 66% identical to that of GlnK protein from several dizotrophs and E. coli.
【Key words】 Azospirillum brasilense Yu62; glnZ gene and the other genes around glnZ; identity;
- 【文献出处】 农业生物技术学报 ,Journal of Agricultural Biotechnology , 编辑部邮箱 ,2001年01期
- 【分类号】Q78
- 【被引频次】1
- 【下载频次】98