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人扁桃体B淋巴细胞mRNA的差异显示分析及活化B细胞表达的新EST的分离

Differential display analysis of mRNA from human tonsil B lymphocytes and isolation of new EST from activated B lymphocytes

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【作者】 殷际义崔莲仙赵庆张正健袁勃

【Author】 YIN Jiyi, CUI Lianxian, ZHAO Qing, et al. National Laboratory of Medical Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100005

【机构】 中国医学科学院中国协和医科大学基础医学研究所医学分子生物学国家重点实验室

【摘要】 目的分离新的B细胞活化基因。方法采用差异显示反转录PCR技术(DDRT-PCR)对人扁桃体活化和静止B细胞mRNA的差异显示情况进行分析,对显示片段进行克隆并行Northern分析,对Northern杂交阳性的cDNA片段进行测序并比较同源性。结果差异显示分析共获得明显差异表达的cDNA片段62条,选择主要表达于活化B细胞上的20条cDNA片段克隆到pGEM-T载体上,并逐一对静止和活化B细胞RNA进行Northern分析,其中6条cDNA片段在活化B细胞中呈Northern杂交阳性且与差异显示情况相符,对它们进行测序,然后通过国际互联网与GenBank,EMBL和DDBJ的DNA数据库比较序列同源性,发现其中4个克隆与已发现的基因具明显同源性,一个克隆是新的,另一个克隆虽然与人T细胞分泌的趋化因子I-309同源性达95%,但二者转录本不同。结论通过DDRT-PCR分离到两个可能为新的B细胞活化基因的cDNA片段,这为进一步克隆新的B细胞活化基因奠定了基础。

【Abstract】 Objective To clone the novel B lymphocyte activation gene. Methods The differential display RT PCR (DDRT PCR) technique was applied to compare mRNA from human tonsil resting and activated B lymphocytes. The differential display cDNA fragments were recovered, reamplified and cloned into pGEM T vectors, then Northern blots were carried out to analyse those fragments. The positive cDNA fragments were sequenced. Results Sixty two differential display cDNA fragments were obtained. Twenty of the 62 cDNA fragments which were mainly or uniquely expressed on activated B lymphocytes were cloned into pGEM T vectors, among which 6 clones were confirmed expressible on activated B cells by Northern blot analysis and named EST XB11, XD11, YA1, ZD11, ZD12 and ZE1 respectively. The sequence analysis had been finished. Four clones (XB11, YA1, ZD11 and ZD12) had high homology with recorded genes and one (XD11) was novel by a computer search against GenBank, EMBL and DDBJ DNA databases. The clone (ZE1) had 95% homology with human T cell secreted chemokine I 309, but they had different transcript. Conclusions Two cDNA fragments (XD11, ZE1) are supposed to be potentially representive of novel B cell activation genes and this research lays a foundation for cloning novel B cell activation genes.

【基金】 攀登计划项目基金
  • 【文献出处】 中华微生物学和免疫学杂志 ,CHINESE JOURNAL OF MICROBIOLOGY AND IMMUNOLOGY , 编辑部邮箱 ,1999年02期
  • 【分类号】R392.12
  • 【下载频次】58
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