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深圳地区甲1(H1 N1)亚型流感病毒基因特性的研究

Characterization of HA1 genes of influenza A (H1-N1) viruses isolated in Shenzhen city

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【作者】 程小雯李良成何建凡

【Author】 CHENG Xiaowen, LI Liangcheng, HE Jianfan. Municipal Hygiene and Anti epidemic Station of Shenzhen, Shenzhen 580020

【机构】 深圳市卫生防疫站

【摘要】 目的 了解近几年H1N1亚型毒株在深圳地区人群中活动加强及“O”相特性出现的分子生物学基础及其基因演变的特性。方法 病毒粒RNA经逆转录合成cDNA,用PCR扩增,产物纯化,采用双脱氧链末端终止法进行核苷酸序列测定并推导出其所编码的氨基酸序列。进化树分析用DNASTAR公司出品的序列分析软件,MegAlign(103版)的Editseq(369版)。结果 根据病毒粒HA1基因特性,至少1995年以来深圳地区人群中同时流行着基因特性不同的三系毒株;1995~1997年H1N1毒株与A新加坡686(H1N1)病毒相比较,其HA1蛋白分子上第54和155位上分别插入和缺失一个糖基化点,同时氨基酸序列发生了替换。结论 近年来深圳地区人群中同时流行着HA1基因不同的三系H1N1亚型毒株。由于HA1蛋白分子上氨基酸序列发生了替换,尤其糖基化位点插入和缺失,造成1995年以来H1N1毒株活动加强,这些可能与毒株“O”相特性再现密切相关。

【Abstract】 Objective To understand the molecular bases of intension of influenza virus activity and emergence of “O” phase of influenza A(H1N1) strains in human population in Shenzhen in recenty years ,and also the evolutionary characterization of influenza A(H1N1) HA1 gene.Methods Virion RNA was transcribed into cDNA by reverse transcriptase, cDNA was amplified by PCR, the products of PCR were purified. Afterward, RNA sequence analsis was performed by the dideoxynucleotide chain termination method using synthetic oligodeoxynucleotide primers. Finally, phylogenetic analysis of the sequencing data was performed with MegAlign(version 1.03) and Editseq (version 3.69) softwares.Results Since 1995, there were three different genetic lineages of influenza A(H1N1) virus HA1 gene cocirculating in men in Shenzhen city.Adding one and deleting one of potential glycosylation sites at 54 and 155 positions of amino acid sequences on HA1 protein domain of H1N1 viruses isolated recently was found as compared with those of A/Singapore/6/86(H1N1) virus. Meanwhile, there were some differences of amino acid sequences on HA1 protein molecules among H1N1 viruses tested and A/Singapore/6/86(H1N1) virus. Conclusion The intension of influenza A(H1N1) virus activity occurred since 1995 was due to emergence of substitution in amino acid sequences, especially the appearance of one addition and one deletion of potential glycosylation sites on their HA1 protein domains, and also was due to occurrence of influenza A(H1N1) virus with feature of “O” phase.

【关键词】 流感病毒亚型基因
【Key words】 Influenza A(H1N1) virus Gene
  • 【文献出处】 中华实验和临床病毒学杂志 ,CHINESE JOURNAL OF EXPERIMENTAL AND CLINICAL VIROLOGY , 编辑部邮箱 ,1999年04期
  • 【分类号】R373
  • 【被引频次】5
  • 【下载频次】73
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