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鹅流感病毒2/96-H5N1亚型毒株RNA1-3及RNA5节段核苷酸全序测定

The complete nucleotide sequences of A/Goose/Guangdong/2/96(H5N1) virus RNA segment 1 3 and 5

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【作者】 郭元吉王敏郭俊峰董婕张烨

【Author】 GUO Yuanji, WANG Min, GUO Junfeng, et al. Institute of Virology, Chinese Academy of Preventive Medicine, Beijng 100052

【机构】 中国预防医学科学院病毒学研究所

【摘要】 目的 明确广东鹅流感病毒296H5 N1 亚型毒株RNA13 和RNA5 节段核苷酸全序列及其所编码蛋白的氨基酸序列,以及这些基因节段与香港禽流感病毒15697H5 N1 亚型毒株相应节段间的关系。方法 病毒粒RNA经逆转录合成cDNA,经聚合酶链反应(PCR) 扩增,产物纯化,采用双脱氧链末端终止法进行核苷酸序列测定。结果 广东鹅流感病毒296H5 N1 亚型毒株RNA13 和RNA5 节段长度分别为2341,2 341 ,2 233 和1565 个核苷酸。它们分别编码PB2( 含759 个氨基酸),PB1( 含757个氨基酸) ,PA( 含716 个氨基酸) 和NP蛋白( 含498 个核苷酸) 。这些蛋白与香港禽流感病毒15697H5 N1 亚型毒株相应蛋白氨基酸序列的同源性分别为96-4% ,97-2% ,97-3 % 和97-0% 。结论 本毒株RNA13 和RNA5 节段长度分别为2 341,2 341,2 233 和1 565 个核苷酸,它们与香港15697H5 N1 亚型毒株间存在着差异

【Abstract】 Objective To determine the nucleotide and amino acid sequences of PB 2, PB 1, PA and NP genes and compared them with sequences of A/HK/156/97(H 5N 1) virus for revealing the relationship between A/Googs/Guangdong/2/96(H 5N 1) and A/HK/156/97(H 5N 1) viruses.Methods Virion RNA was transcribed into cDNA by reverse transcriptase, cDNA amplified by PCR, the productions of PCR were purified. Afterward, RNA sequence analysis was performed by the dideoxynucleotide chain termination method, using synthetic oligodeoxynucleotide primers. Results The lengths of A/Goose/Guangdong/2/96(H 5N 1) virus RNA segment 1 3 and 5 contain 2 341, 2 341, 2 233 and 1 565 nucleotides, respectively. They encode for PB 2 (759 amino acids), PB 1 (757 amino acids), PA (716 amino acids) and NP (498 amino acids) proteins. The homologies of amino acid sequences of PB 2, PB 1, PA and NP proteins between A/Goose/Guangdong/2/96 (H 5N 1) and A/HK/156/97 (H 5N 1) virus are 96.4%, 97.2%, 97.3% and 97.0%, respectively. Conclusion The lengths of RNA segment 1 3 and 5 of Goose strain are 2 341, 2 341, 2 233 and 1 565 nucleotides, respectively. The nucleotide sequences of these genes are distinguish able from those of Hong Kong virus.

  • 【文献出处】 中华实验和临床病毒学杂志 ,CHINESE JOURNAL OF EXPERIMENTAL AND CLINICAL VIROLOGY , 编辑部邮箱 ,1999年03期
  • 【分类号】R373.13
  • 【被引频次】3
  • 【下载频次】59
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