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用PCR SSCP方法检测中国人Alport综合征COL4A5基因突变

Detection of mutations in COL4A5 gene by PCR SSCP analysis in Chinese Alport syndrome(AS) patients

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【作者】 丁洁郭顺华俞礼霞杨霁云

【Author】 DING Jie, GUO Shunhua, YU Lixia, et al. Department of Pediatrics, First Hospital, Beijing Medical University, Beijing 100034

【机构】 北京医科大学第一医院儿科

【摘要】 目的 检测中国人Alport 综合征(AS) 患者编码Ⅳ型胶原α5 链的COL4A5 基因突变。方法 提取18 例中国X连锁显性遗传型AS患者基因组DNA,据COL4A5 基因中与外显子相邻的内含子序列设计引物,分别作DNA聚合酶链式反应(PCR) ,扩增了该基因第20~51 外显子。以琼脂糖凝胶电泳鉴定产物,作单链构象多态性(SSCP) 分析检测PCR 产物,对迁移率异常者进行DNA 测序。结果 PCRSSCP分析发现患者8 的20、39 和46 外显子,以及患者90 的26 外显子的PCR 产物单链DNA迁移率异常,亦发现患者8 之母存在与其相同的异常迁移带以及正常迁移带。DNA 测序证实患者8 的COL4A5 基因第20 外显子1157 和1158 位缺失CC两个碱基,而第39 及46 外显子为同义突变;患者90 第26 外显子2171 位缺失一个C碱基。这两位患者的缺失突变均致移码突变,并使终止密码子提前出现,导致Ⅳ型胶原α5 链显著缩短。结论 首次报道了中国大陆AS患者COL4A5 基因的两个小缺失突变,其中一个缺失突变伴有两个同义突变,未发现大片段缺失及重组突变。通过PCRSSCP分析亦证实一患者之母为COL4A5 基因的?

【Abstract】 Objective To detect mutations in COL4A5 gene encoding type Ⅳ collagen α 5 chain in Chinese AS patients Methods Genomic DNA from 18 unrelated patients (12 males and 6 females) with X linked AS were analyzed So far, 32 of 51 exons at the 3′ end portion of COL4A5 gene were amplified with the primers synthesized according to the published flanking intronic sequences The PCR products were further analyzed by agarose gel electrophoresis and single strand conformation polymorphism (SSCP) analysis The PCR products showing polymorphism by SSCP analysis were directly sequenced Results By PCR SSCP analysis, 4 PCR products were identified with different mobility of single strand DNA, exon 20, 39 and 46 in patient No 8; exon 26 in patient No 90 The PCR product of No 8 patient′s mother was revealed with a special pattern containing single strand DNA bands identical to those of the No 8 patient and the normal control DNA sequencing analyses revealed: (1) silent mutations in exon 46 and 39; (2) exon 20 was deleted with CC nucleotides and exon 26 was deleted with one C nucleotide , both of which induced nonsense mutations resulting in remarkably truncated α 5 chains of type Ⅳ collagen Conclusion For the first time, mutations in COL4A5 gene were identified in Chinese AS patients in the mainland of China Two small deletions were detected, one of which was accompanied by two silent mutations No major gene deletion or rearrangement was detected The heterozygote status of one patient′s mother was also demonstrated by PCR SSCP analysis

【基金】 国家自然科学基金
  • 【文献出处】 中华儿科杂志 ,Chinexe Journal of Pediatrics , 编辑部邮箱 ,1999年08期
  • 【被引频次】18
  • 【下载频次】122
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