节点文献

传染性法氏囊病病毒中国强毒株A节段cDNA基因的克隆和序列分析

CLONING AND SEQUENCE ANALYSIS OF SEGMENT A cDNA OF A VERY VIRULENT INFECTIOUS BURSAL DISEASE VIRUS

  • 推荐 CAJ下载
  • PDF下载
  • 不支持迅雷等下载工具,请取消加速工具后下载。

【作者】 胡子信; 张曼夫;

【Author】 HU Zi-xin, ZHANG Man-fu (Department of Molecular Biology and Biochemistry, China Agricultural University, Beijing 100094, China)

【机构】 中国农业大学生物化学与分子生物学系!北京100094;

【摘要】 以来自哈尔滨传染性法氏囊病病毒(IBDV) 强毒株(Harbin 毒株,H) 的基因组RNA为模板,用反转录聚合酶链反应(RT- PCR) 的方法得到了其A 节段的全长cDNA 片段,分5'端(1 659bp) 和3'端(1 444bp) 上下两段分别克隆到pGEMB○R - T 载体上,测定了其核苷酸顺序,在长为3 101 bp 中含有两个阅读框ORFA1 和ORFA2 ,分别编码1 012 个氨基酸的前体蛋白(VP2 - 4 -3) 和145 个氨基酸的VP5,ORFA1 和ORFA2 有部分的重叠。将核苷酸序列及推测出的氨基酸序列与已报道的IBDV 血清Ⅰ型和Ⅱ型毒株的相应序列进行了比较,结果表明:H 毒株与其它血清Ⅰ型毒株之间,在核苷酸水平上存在25bp - 267bp 的差异;在氨基酸水平上存在17 ~40 个氨基酸的差异。在VP2 - 4 - 3 内比较显示,H 毒株与P2 、Cu- 1 之间氨基酸的差异最小为1 .7% ,H 毒株与UK661 之间氨基酸的差异最大为3 .9 % 。变异主要发生在VP2 的可变区(206 - 350 位氨基酸) ,在H 毒株所特有的12 个氨基酸当中,该区就占5 个,代表1 .76 % 的变异。VP4、VP3 和VP5区各有

【Abstract】 By RT-PCR, the nucleotide sequences of the Harbin vvIBDV segment A, two ORFS for VP5 and precursor polyprotein were determined. The results showed that the cloned 3101bp segment A gene contains two overlapping open reading frames (ORFA1 and ORFA2). The large ORF of 3036bp encodes a polyprotein (VP2-4-3), whereas the small ORF is 435bp coding VP5. The deduced amino acid sequence of the Harbin strain was compared with those of other serotype 1 and 2 strains. The results showed that the sequence of the Chinese isolate, the Harbin strain, has variations for virulence and antigenecity. There are 25 to 267 nucleotide differences among segment A of Harbin strain and the other serotype I strains of IBDV. The polyprotein encoded by Harbin strain showed 17 to 40 amino acid differences from those of the other serotype I strains, with 12 substitutions unique to Harbin strain. The minimum amino acid divergence within polyprotein (1.7%) was observed among Harbin strain and P2, Cu-1 of serotype 1. The maximum amino acid difference was 3.9% observed between Harbin strain and Uk661. Within the 454 residues of VP2 of Harbin strain, there are 5 amino acid substitutions, representing 1.76% variation at the VP2 variable region between residues 206 to 350. Within the 267 residues of VP4, there are only 2 amino acid substitutions, representing 0.74% variation. Within the 289 residues of VP3, there are also 2 amino acid substitutions, representing 0.69% variation. Within the 145 residues of VP5, there are 2 amino acid substitutions, representing 1.38% variation. Harbin strain is neither similar to the vv strains from Europe, Japan and Israel nor to the variant strains from the United States and China Guanzhou. It is most closely related to the strains isolated earlier from Europe, however has distinct amino acid mutations in variable region, especially in two hydrophilic domains.

【基金】 国家自然科学基金;北京市自然科学基金;国家教委博士点基金
  • 【文献出处】 病毒学报 ,CHINESE JOURNAL OF VIROLOGY , 编辑部邮箱 ,1999年04期
  • 【分类号】S852.65
  • 【被引频次】28
  • 【下载频次】93
节点文献中: 

本文链接的文献网络图示:

本文的引文网络