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金黄色葡萄球菌核酸酶1-110片段的折叠稳定性和协同性以及影响折叠稳定性的关键因素
Folding stability and cooperativity in the three forms of 1-110 residues fragment of staphylococcal nuclease and the key factor affecting folding stability
【Author】 Dongsheng Liu Tao Xie Yingang Feng Lu Shan Jinfeng Wang (National Laboratory of Biomacromolecules,Institute of Biophysics,Chinese Academy of Sciences,Beijing 100101,China)
【机构】 中国科学院生物物理研究所生物大分子国家重点实验室;
【摘要】 金黄色葡萄球菌核酸酶 N 末端110片段(SNase110),包含残基1-110,处于去折叠态和折叠态之间的动态平衡中,且主要以去折叠态存在。加入氧化三甲基胺(TMAO,Trimethylamine N-oxide),可以使 SNase110片段的折叠形成协同稳定的β桶结构。G88W110片段包含核酸酶1-110序列,其88位的甘氨酸被色氨酸替代,V66W110片段包含核酸酶1-110序列,其66位的缬氨酸被色氨酸替代。由于色氨酸的稳定作用, 它在生理条件下折叠成稳定协同的结构,其结构与核酸酶天然态结构中相应部分十分相似。G88W 和 V66W 突变主要通过增加β桶的折叠稳定性而 TMAO 主要通过增强蛋白主链与溶液的增溶作用来使蛋白质趋于折叠。运用远紫外及近紫外圆二色谱、内源荧光光谱和核磁共振光谱等方法确定了 GB8W110,V66W110和 SNase110片段在2.0 M TMAO 浓度下的去折叠自由能、折叠构象和内运动。用异核多维核磁共振方法,计算了三个片段的溶液三维结构,它们都形成了稳定的β桶结构,α螺旋也初步形成,但都存在一段无序的结构。G88W110的结构最紧凑,而 V66W110结构比较松散。G88W110,V66W110和在2.0 M TMAO 中的 SNase110显示出不同的主链弛豫性质,突变和渗透质对蛋白结构和运动性的影响不同,不同的折叠程度反映出不同的弛豫性质,而 ms-μs 时间的运动可能与折叠的起始位点有关。主链动态特性和脲变性曲线都表明三个片段处于不同的折叠状态.片段的结构和稳定性与β桶结构中β链的堆积程度紧密相关,β桶和蛋白整体结构的形成是偶连的,三个片段的折叠过程是高度协同的。
【Abstract】 This study investigates the folding stability and cooperativity in the three forms of 1-110 residues fragment of staphylococcal nuclease(SNase110),namely G88W110 and V66W110 in aqueous solution and SNase110 in 2.0 M TMAO.The unfolding free energies,folding conformations,and internal motions of these fragments were determined by far-and near-UV CD,intrinsic tryptophan fluorescence,and NMR spectroscopy.The fragments are found to be in different folding states having different folding stabilities and dynamic properties.Both Gggw and V66W single mutation as well as a small osmolyte(TMAO)can fold the fragment into a native-like conformation.G88W110 adopts a relatively rigid structure representing a most stable native-like β-subdomain conformation of the three fragments.V66W110 and TMAO stabilized SNase110 produce unstable structures having an unstable“β-barrel”structural region in the tertiary conformation.The different folding status accounts for the different backbone dynamic and urea-unfolding transition features displayed by the three fragments.The structure and stability of the fragments are correlated closely to the packing of the β-strands in the“β-barrel”,which plays a key role in the formation of a stable structure of the fragment.The G20I/G29I mutant variants of the three forms 110-residues SNase fragments provide the strong support for it.The formation of“β-barrel”and overall structure is coupled and the folding process is highly cooperative in the three 110-residue SNase fragments.
- 【会议录名称】 第十四届全国波谱学学术会议论文摘要集
- 【会议名称】第十四届全国波谱学学术会议
- 【会议时间】2006-10
- 【会议地点】中国陕西西安
- 【分类号】R378;R310
- 【主办单位】中国物理学会波谱专业委员会