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基于RIP-Seq分析TBL2在心肌细胞缺氧/复氧损伤中的作用机制
Mechanism of TBL2 in cardiomyocyte hypoxia/reoxygenation injury based on RIP-Seq analysis
【摘要】 目的:探讨RNA结合蛋白(RNA binding protein, RBP)转导蛋白β样蛋白2(transducin beta-like protein 2, TBL2)在缺氧/复氧(hypoxia/reoxygenation, H/R)诱导的心肌细胞损伤中的作用及其分子机制。方法:构建H9C2大鼠心肌细胞H/R模型,体外模拟心肌缺血。使用小干扰RNA(siRNA)沉默TBL2。通过CCK-8评估细胞活力,ELISA检测炎症因子白细胞介素-6(IL-6)和IL-1α,Western blot检测内质网应激(endoplasmic reticulum stress,ERS)标志物转录激活因子4(activating transcription factor 4, ATF4)的表达水平。运用RNA免疫共沉淀测序(RNA immunoprecipitation sequencing, RIP-Seq)筛选TBL2靶RNA,并进行GO和KEGG功能注释和富集分析。RIP-qPCR验证TBL2与ATF4的结合。结果:H/R处理后,细胞活力显著下降;IL-1α和IL-6升高,TBL2和ATF4蛋白上调(P<0.01)。TBL2沉默显著改善细胞活力并降低炎症因子表达(P<0.01),同时降低ATF4表达(P<0.05)。RIP-Seq显示TBL2结合的RNA主要涉及RNA剪接、蛋白加工与ERS等功能通路。RIP-qPCR证实ATF4 mRNA在TBL2复合物中显著富集(P<0.01)。结论:TBL2在心肌梗死细胞模型中显著高表达,参与心肌细胞的ERS与炎症反应。沉默TBL2可减轻H/R诱导的心肌细胞损伤,改善心肌细胞活力并减轻炎症反应与ERS。TBL2作为RBP,通过结合ATF4 mRNA,促进其表达,推动细胞损伤进展。
【Abstract】 AIM: To investigate the role of the RNA-binding protein(RBP) transducin beta-like protein 2(TBL2) in hypoxia/reoxygenation(H/R)-induced myocardial injury and its molecular mechanism. METHODS: The H/R model was established using H9C2 rat myocardial cells to simulate myocardial ischemia in vitro. TBL2 was silenced using small interfering(siRNA). Cell viability was assessed by CCK-8, inflammatory factors interleukin-6(IL-6) and IL-1α were measured by ELISA, and endoplasmic reticulum stress(ERS) marker activating transcription factor 4(ATF4) was detected by Western blot. RNA immunoprecipitation sequencing(RIP-Seq) was used to identify TBL2-targeted RNAs, followed by GO and KEGG functional annotation and enrichment analysis. RIP-qPCR was performed to validate the binding of TBL2 with ATF4. RESULTS: After H/R treatment, cell viability significantly decreased, IL-1α and IL-6 levels were elevated, and TBL2 and ATF4 protein levels were upregulated(P<0. 01). Silencing of TBL2 significantly improved cell viability and reduced the expression of inflammatory factors(P<0. 01), while also decreasing ATF4 expression(P<0. 05). RIP-Seq revealed that RNAs bound by TBL2 were primarily involved in RNA splicing, protein processing, and ERS-related pathways. RIP-qPCR confirmed that ATF4 mRNA was significantly enriched in the TBL2 complex(P<0. 01). CONCLUSION: TBL2 is significantly upregulated in the myocardial infarction cell model and participates in ERS and inflammatory response in myocardial cells. Silencing TBL2 alleviates H/R-induced cell damage, improves myocardial cell viability, and reduces inflammation and ERS. As an RBP, TBL2 promotes the expression of ATF4 by binding to its mRNA, thereby advancing cell injury.
【Key words】 myocardial ischemia reperfusion injury; RNA binding protein; endoplasmic reticulum stress; transducin beta-like protein 2; activating transcription factor 4;
- 【文献出处】 中国病理生理杂志 ,Chinese Journal of Pathophysiology , 编辑部邮箱 ,2026年01期
- 【分类号】R542.2
- 【下载频次】7