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针对禽致病性大肠埃希菌ISS及ompT基因的TaqMan双重荧光定量PCR方法的建立及应用
Development and Application of a TaqMan Dual-Fluorescence Quantitative PCR Method Targeting the ISS and ompT Genes of Avian Pathogenic Escherichia coli (APEC)
【摘要】 目的 建立一种检测禽致病性大肠埃希菌(APEC)的双重TaqMan qPCR方法。方法 以APEC保守基因ISS(血清抗性基因)及ompT(保护蛋白基因)为靶标设计特异性引物,以Blunt-ISS及Blunt-ompT质粒标准品为模板,建立双重qPCR检测方法。结果 ISS建立的qPCR方法标准曲线为Y=-3.367+38.518,R~2=0.99,拷贝数10~2~10~9范围内与Ct值有很好的线性关系;ompT建立的qPCR方法标准曲线为Y=-3.314+36.817,R~2=0.997,拷贝数10~2~10~9范围内与Ct值有很好的线性关系。特异性试验显示两种方法与其他鸭病无交叉反应;敏感性实验表明,两种方法对Blunt-ISS及Blunt-ompT的最低检测限均为10~2拷贝数;重复性实验表明,相同条件下建立的两种方法重复性良好;60份临床组织样品检测结果与普通PCR符合率为100%。结论 本研究建立的TaqMan qPCR方法特异性强,灵敏性高,重复性好,适用于临床检测。
【Abstract】 Objective To establish a dual TaqMan qPCR method for detecting avian pathogenic Escherichia coli(APEC).Methods Specific primers were designed targeting the conserved genes ISS(serum resistance gene) and ompT(protective protein gene) of APEC. Using Blunt-ISS and Blunt-ompT plasmid standards as templates, a dual qPCR detection method was established.Results The standard curve for the qPCR method targeting ISS was Y=-3.367X+38.518, with R2=0.99, showing a strong linear relationship between the Ct value and copy numbers ranging from 102 to 109. The standard curve for the qPCR method targeting ompT was Y=-3.314X+36.817, with R2=0.997, also demonstrating a strong linear relationship between the Ct value and copy numbers ranging from 102 to 109. Specificity tests confirmed no cross-reactivity with other duck pathogens. Sensitivity experiments indicated that the limit of detection(LOD) for both Blunt-ISS and Blunt-ompT was 102 copies. Repeatability tests showed that both method exhibited excellent reproducibility under identical conditions. Clinical testing of 60 tissue samples revealed 100% concordance with conventional PCR.Conclusion The TaqMan qPCR method established in this study is highly specific, sensitive, reproducible, and suitable for clinical detection.
【Key words】 Avian pathogenic Escherichia coli; ISS; ompT; dual-fluorescence quantitative PCR; TaqMan;
- 【文献出处】 实验动物科学 ,Laboratory Animal Science , 编辑部邮箱 ,2026年01期
- 【分类号】S852.61
- 【下载频次】12