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基于宏病毒组学对流浪犬血液中DNA病毒群落的研究

Exploring the DNA Virome in Blood of Stray Dogs Metaviromic

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【作者】 刘荣启黄镕杰贺萌萌梁慧贤王丹竹李根邓奇精罗均郭霄峰

【Author】 LIU Rongqi;HUANG Rongjie;HE Mengmeng;LIANG Huixian;WANG Danzhu;LI Gen;DENG Qijing;LUO Jun;GUO Xiaofeng;Shenzhen Inspection and Testing Center of Agricultural Product Quality and Safety;College of Veterinary Medicine,South China Agricultural University;Key Laboratory of Animal Vaccine Development,Ministry of Agriculture and Rural Affairs;Zhaoqing Branch Center of Guangdong Laboratory for Lingnan Modern Agricultural Science and Technology;

【通讯作者】 郭霄峰;

【机构】 深圳市农产品质量安全检验检测中心华南农业大学兽医学院农业农村部兽用疫苗创制重点实验室岭南现代农业科学与技术广东省实验室肇庆分中心

【摘要】 为调研现阶段流浪犬血液中的DNA病毒群落结构组成及其功能预测,该研究利用宏病毒组学技术对采集自深圳救助站的流浪犬血液进行宏病毒高通量测序,过滤并去除宿主序列,用小片段序列Reads分析结合组装序列Contigs分析,探究DNA病毒群落组成的特点。结果表明,流浪犬血液中DNA病毒群落的优势病毒目为疱疹病毒目(Herpesvirales)、有尾噬菌体目(Caudovirales)和环状病毒目(Cirlivirales),优势病毒属为水痘疱疹病毒属(Varicellovirus)和圆环病毒属(Circovirus)。此外,利用KEGG数据库和COG数据库对功能基因进行分析。结果表明,KEGG数据库分析得到7个一级分类功能,COG数据库分布在20个COG类别。功能类别主要集中在在可移动基因组、一般功能预测、遗传信息过程、功能层次结构、代谢和转录。揭示深圳地区流浪犬血液中DNA病毒群落中存在丰富的疱疹病毒、圆环病毒和噬菌体,提示现阶段深圳地区流浪犬可能存在规模性的免疫低下和潜在共感染,具有较重要的间接公共卫生意义,为进一步挖掘验证流浪犬血液DNA病毒潜在危害性和功能基因作用提供参考。

【Abstract】 To investigate the composition and functional potential of DNA viral communities in stray dog blood,this study employed viral metaviromics to perform high-throughput sequencing of blood samples collected from stray dogs at a rescue center in Shenzhen. Host-derived sequences were filtered and removed,followed by analysis of shortsequence reads and assembled contigs to characterize the DNA viral community structure. The results revealed that the dominant viral orders were Herpesvirales,Caudovirales,and Cirlivirales,while the predominant genera were Varicellovirus and Circovirus. Functional gene annotation was conducted using the KEGG and COG databases. KEGG analysis identified seven major functional categories,and COG classification covered 20 functional groups. These functional categories primarily included mobile genetic elements,general function prediction,genetic information processing,multi-level functional structures,metabolism,and transcription. This study demonstrating that the DNA virome in stray dog blood from the Shenzhen region is dominated by herpesviruses,circoviruses,and bacteriophages,suggesting potential widespread immunosuppression and co-infection risk within the local stray dog population. These findings highlight significant indirect public health implications and provide a foundation for further exploration of the pathogenicity and functional roles of DNA viruses in stray dog blood.

【基金】 深圳市基础研究专项(深圳市自然科学基金)面上项目(JCYJ20230807152700001)
  • 【文献出处】 广东畜牧兽医科技 ,Guangdong Journal of Animal and Veterinary Science , 编辑部邮箱 ,2026年01期
  • 【分类号】S852.65
  • 【下载频次】25
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