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基于微生物多样性绝对定量测序技术的水体微生物负荷计量方法及标准化初探(英文)
Preliminary study on a quantification method and standardization for aquatic microbial loads based on microbial diversity absolute quantitative sequencing
【摘要】 This study establishes and validates a method for the precise quantification of aquatic microbial loads using microbial diversity absolute quantitative sequencing. By adding synthetic spike-in DNA to water samples from the Dahei River prior to DNA extraction and 16S rRNA gene sequencing, it generates standard curves to convert sequencing data into absolute microbial copy numbers. The method, which is proved highly accurate(R~2 > 0.99), reveals a clear contrast between the river sites: the upstream community has not only a significantly higher total microbial load but also a completely different makeup of species compared to the downstream site. This approach effectively overcomes the limitations of relative abundance analysis, providing a powerful tool for environmental monitoring, and proposes key steps for future standardization to ensure data comparability and integration.
【Abstract】 This study establishes and validates a method for the precise quantification of aquatic microbial loads using microbial diversity absolute quantitative sequencing. By adding synthetic spike-in DNA to water samples from the Dahei River prior to DNA extraction and 16S rRNA gene sequencing, it generates standard curves to convert sequencing data into absolute microbial copy numbers. The method, which is proved highly accurate(R~2 > 0.99), reveals a clear contrast between the river sites: the upstream community has not only a significantly higher total microbial load but also a completely different makeup of species compared to the downstream site. This approach effectively overcomes the limitations of relative abundance analysis, providing a powerful tool for environmental monitoring, and proposes key steps for future standardization to ensure data comparability and integration.
【Key words】 absolute quantification; microbial load; 16S rRNA sequencing; spike-in; standardization; aquatic microbes;
- 【文献出处】 China Standardization ,中国标准化(英文版) , 编辑部邮箱 ,2026年01期
- 【分类号】Q938.8
- 【下载频次】5