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基于微生物多样性绝对定量测序技术的水体微生物负荷计量方法及标准化初探(英文)

Preliminary study on a quantification method and standardization for aquatic microbial loads based on microbial diversity absolute quantitative sequencing

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【作者】 温丽景利斌李夏伟陆静金浩伟杨永启李雪玲

【Author】 Wen Li;Jing Libin;Li Xiawei;Lu Jing;Jin Haowei;Yang Yongqi;Li Xueling;Market Supervision Evaluation and Inspection Center of Inner Mongolia Autonomous Region;Inner Mongolia Institute of Quality and Standardization;MGI Tech Co., Ltd.;Institute of Emergency Management, Linyi Vocational College;State Key Laboratory of Reproductive Regulation and Breeding of Grassland Livestock, College of Life Sciences, Inner Mongolia University;

【通讯作者】 李雪玲;

【机构】 Market Supervision Evaluation and Inspection Center of Inner Mongolia Autonomous RegionInner Mongolia Institute of Quality and StandardizationMGI Tech Co., Ltd.Institute of Emergency Management, Linyi Vocational CollegeState Key Laboratory of Reproductive Regulation and Breeding of Grassland Livestock, College of Life Sciences, Inner Mongolia University

【摘要】 This study establishes and validates a method for the precise quantification of aquatic microbial loads using microbial diversity absolute quantitative sequencing. By adding synthetic spike-in DNA to water samples from the Dahei River prior to DNA extraction and 16S rRNA gene sequencing, it generates standard curves to convert sequencing data into absolute microbial copy numbers. The method, which is proved highly accurate(R~2 > 0.99), reveals a clear contrast between the river sites: the upstream community has not only a significantly higher total microbial load but also a completely different makeup of species compared to the downstream site. This approach effectively overcomes the limitations of relative abundance analysis, providing a powerful tool for environmental monitoring, and proposes key steps for future standardization to ensure data comparability and integration.

【Abstract】 This study establishes and validates a method for the precise quantification of aquatic microbial loads using microbial diversity absolute quantitative sequencing. By adding synthetic spike-in DNA to water samples from the Dahei River prior to DNA extraction and 16S rRNA gene sequencing, it generates standard curves to convert sequencing data into absolute microbial copy numbers. The method, which is proved highly accurate(R~2 > 0.99), reveals a clear contrast between the river sites: the upstream community has not only a significantly higher total microbial load but also a completely different makeup of species compared to the downstream site. This approach effectively overcomes the limitations of relative abundance analysis, providing a powerful tool for environmental monitoring, and proposes key steps for future standardization to ensure data comparability and integration.

【基金】 supported by the National Natural Science Foundation of China (Grant No. 32160172);the Key Science-Technology Project of Inner Mongolia (2023KYPT0010);the Natural Science Foundation of Inner Mongolia Autonomous Region of China (Grant No. 2025QN03006);the 2023 Inner Mongolia Public Institution High-level Talent Introduction Scientific Research Support Project
  • 【文献出处】 China Standardization ,中国标准化(英文版) , 编辑部邮箱 ,2026年01期
  • 【分类号】Q938.8
  • 【下载频次】5
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