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上海市浦东新区中青年感染人群HIV-1分子流行特征及耐药情况分析
Molecular epidemiologic characteristics and pretreatment drug resistance of HIV-1 in young and middle-aged first-diagnosed infections, 2019–2021 in Pudong New Area, Shanghai
【摘要】 目的 了解上海市浦东新区2019—2021年<50岁的中青年人群中未经抗病毒治疗的新确诊感染者/患者HIV-1分子流行病学特征及耐药情况,为艾滋病防治策略提供参考依据。方法 收集2019—2021年浦东新区确诊实验室HIV-1抗体首次确诊阳性且人口学信息满足条件的347份<50岁人群血样本,采用反转录聚合酶链式反应(RT-PCR)扩增HIV-pol基因,进行治疗前耐药基因检测及HIV-1亚型检测。结果 获取302例HIV-pol区基因全序列片段,HIV-1流行簇主要有CRF07_BC(40.40%)、CRF01_AE(36.09%)、CRF55_01B(8.28%);感染途径为同性性传播(72.52%)和异性性传播(27.48%);不同性传播途径的病毒亚型分布差异有统计学意义(P=0.003)。HIV-1耐药率为5.96%,低中高度耐药均有出现,其中NNRTIs、NRTIs、PIs分别为4.97%、0.66%、0.33%;不同亚型之间的耐药率差异有统计学意义(P=0.037)。结论 上海市浦东新区2019—2021年中青年人群新确诊HIV-1感染者,基因亚型主要以CRF07_BC、CRF01_AE、CRF55_01B为主,但已出现新的重组毒株,呈现多元化发展趋势,且在多种亚型中出现不同程度的治疗前耐药。
【Abstract】 Objective To investigate the molecular epidemiological characteristics and drug resistance of HIV-1among newly diagnosed antiretroviral therapy(ART)-naive infected individuals aged < 50 years in Pudong New Area,Shanghai, 2019–2021, and to provide evidence to refine local HIV prevention and control strategies. Methods Blood samples(n=374) were collected from individuals newly diagnosed with HIV infection between 2019 and 2021. Inclusion criteria were as follows:(1) confirmed first-time HIV-positive diagnosis by Western blot and without prior ART,(2) age less than 50 years,(3) voluntary participation, and(4) current residence or employment in Pudong New Area. Exclusion criteria were:(1) unsuccessful RNA extraction or sequencing,(2) mixed bases in the HIV-pol region sequence ≥5%, and(3) sequences shorter than 1 000 base pairs. The HIV-1 pol gene was amplified by reverse transcription-polymerase chain reaction(RT-PCR) for both pretreatment drug resistance genotyping and HIV-1 subtype determination, with subsequent analysis using the Stanford University HIV Drug Resistance Database for 302 successfully sequenced samples.Demographic and epidemiologic data were collected through structured in-person interviews. Results A total of 13 HIV-1 subtypes and unique recombinant forms(URFs) were identified among the 302 sequenced samples, of which 72.52%were from homosexual and 27.48% from heterosexual infections. The predominant strains were CRF07_BC(40.40%),CRF01_AE(36.09%) and CRF55_01B(8.28%). A significant variance in the distribution of viral subtypes was observed among individuals infected by different sexual transmission routes(χ2=22.161, P=0.003). However, the distribution of the prevalent strains CRF01_AE, CRF07_BC and CRF55_01B did not differ significantly between homosexual and heterosexual transmission(χ2=4.854, P=0.088), nor among the three age groups 15–24, 25–34 and 35–49 years(χ2=1.383, P=0.847). Resistance analysis showed a resistance rate of 5.96% in this population, with resistance levels ranging from low to intermediate to high. Non-nucleoside reverse transcriptase inhibitors(NNRTIs), nucleoside reverse transcriptase inhibitors(NRTIs) and protein inhibitors(PIs) accounted for 4.97%, 0.66% and 0.33% of resistance,respectively. The difference in resistance rates between subtypes was statistically significant(χ2=10.511, P=0.037). All cases(n=25) of the recombinant subtype CRF55_01BC had mutations at the resistance locus, resulting in an 88.00%incidence of mutations at potential resistance loci and a 12.00% incidence of resistance associated with moderate to high levels of resistance. Conclusions From 2019 to 2021, among the newly diagnosed HIV-1 infected individuals of young and middle-aged population in Pudong New Area, Shanghai, the genetic subtypes were predominantly CRF07_BC,CRF01_AE and CRF55_01B. However, new recombinant strains have emerged, indicating a trend toward diversification.In addition, varying degrees of pre-treatment drug resistance were observed in several subtypes.
【Key words】 HIV-1; young and middle-aged population; HIV-pol gene; genotype; Shanghai Pudong;
- 【文献出处】 中国公共卫生 ,Chinese Journal of Public Health , 编辑部邮箱 ,2025年02期
- 【分类号】R181.3;R512.91
- 【下载频次】42