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蒺藜苜蓿异黄酮合成酶的新颖结构特征揭示其独特的酶促机制(英文)

Novel Structural Features of Isoflavone Synthase from Medicago truncatula Shed Light on Its Unique Enzymatic Mechanism

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【作者】 史超叶朝阳徐飞杜香宁陈张鑫顾明月邓洁王伟刘良裕王梅英苏晓东刘合力尚明英黄力新常振战

【Author】 SHI Chao;YE Zhao-Yang;XU Fei;DU Xiang-Ning;CHEN Zhang-Xin;GU Ming-Yue;DENG Jie;WANG Wei;LIU Liang-Yu;WANG Mei-Ying;SU Xiao-Dong;LIU He-Li;SHANG Ming-Ying;HUANG Li-Xin;CHANG Zhen-Zhan;Department of Biophysics,School of Basic Medical Sciences,Peking University;State Key Laboratory of Protein and Plant Gene Research,School of Biological Sciences,Peking University;Clinical Research Center Affiliated Hospital,Guizhou Medical University;State Key Laboratory of Natural and Biomimetic Drugs,School of Pharmaceutical Sciences,Peking University;Department of Natural Medicines,School of Pharmaceutical Sciences,Peking University;

【通讯作者】 常振战;

【机构】 北京大学基础医学院生物物理系北京大学生命科学院蛋白质工程及植物基因工程国家重点实验室贵州医科大学附属医院临床医学研究中心北京大学药学院天然药物与仿生药物国家重点实验室北京大学药学院天然药物学系

【摘要】 异黄酮主要分布于豆科植物中,具有丰富的保健功效。异黄酮合成酶(IFS)是一种膜结合细胞色素P450酶(P450),催化独特的芳环迁移和羟基化。到目前为止,研究得到的植物P450酶晶体结构数量有限。通过培养硒代蛋氨酸取代晶体,利用MAD方法测定了蒺藜苜蓿IFS分辨率为1.9?的晶体结构,并进行了分子对接和突变研究。结合咪唑的IFS结构具有Iα螺旋-环-Iβ螺旋基序,与其他P450酶的螺旋I相对应。与常见的P450结构相比,IFS/咪唑复合物结构包含1个额外的结构域,即γ-结构域。IFS/咪唑复合物结构是一种同源二聚体,其中一个分子的γ-结构域与另一个分子的β-结构域发生作用。血红素基团平面与Iα螺旋-环-Iβ螺旋基序形成约40°的夹角。分子对接和突变研究表明,Trp-128和Asp-300可能在底物结合和识别中发挥重要作用。来自Iα螺旋-环-Iβ螺旋基序的Phe-301、Ser-303和Gly-305可能在芳环迁移中发挥重要作用。这些新颖的结构特征揭示了IFS独特的反应机制,为在豆科作物中进行IFS育种工程奠定了基础。

【Abstract】 Isoflavones which mainly distributed in leguminous plants have plenty of health benefits.Isoflavone synthase(IFS) is a membrane-associated cytochrome P450 enzyme(CYP450) which carries out the unique aryl-ring migration and hydroxylation. So far, few crystal structures of plant P450s have been obtained. We determined the crystal structure of IFS fromMedicago truncatulaat 1. 9 ? by MAD method using a selenomethionine substituted crystal and conducted molecular docking and mutagenesis study. The structure of IFS complexed with imidazole exhibits the helix Iα-loop-helix Iβ motif which corresponds to helix I of other P450s. Compared with structures of common P450s, IFS/imidazole structure contains an extra domain, i. e., the γ-domain. The structure reveals a homodimer in which the γ-domain of one molecule interacts with the β-domain of another. The plane of heme group makes an angle of approximately 40° with the helix Iα-loop-helix Iβ motif. Molecular docking combined with mutagenesis study suggested that Trp-128 and Asp-300 might play important roles in substrate binding and recognition. Phe-301, Ser-303 and Gly-305 from the helix Iα-loop-helix Iβ motif may play important roles in the aryl-ring migration. These novel structural features reveal insights into the unique reaction mechanism of IFS and provide a basis for engineering IFS in leguminous crops for health purpose.

【基金】 Supported by National Natural Foundation of China (No.32171418)~~
  • 【文献出处】 中国生物化学与分子生物学报 ,Chinese Journal of Biochemistry and Molecular Biology , 编辑部邮箱 ,2025年08期
  • 【分类号】Q946.5
  • 【下载频次】9
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