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IGF2BP3通过m6A-EP300轴介导乳酸化修饰驱动三阴性乳腺癌代谢与表观遗传交互作用

IGF2BP3 drives the metabolic-epigenetic crosstalk in triple-negative breast cancer through m6A-EP300 axis-mediated lactylation modification

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【作者】 李逸涵; 王子文; 陈锐; 杨海燕; 蔡梦媛; 李驿洵; 吴柯非; 王雨欣; 丁强;

【Author】 LI Yihan;WANG Ziwen;CHEN Rui;YANG Haiyan;CAI Mengyuan;LI Yixun;WU Kefei;WANG Yuxin;DING Qiang;Breast Disease Center,the First Affiliated Hospital of Nanjing Medical University;

【通讯作者】 丁强;

【机构】 南京医科大学第一附属医院乳腺病中心;

【摘要】 目的:探讨乳酸对三阴性乳腺癌(triple-negative breast cancer,TNBC)细胞恶性行为的影响,并揭示胰岛素样生长因子2 mRNA结合蛋白3(insulin-like growth factor 2 m RNA binding protein 3,IGF2BP3)通过m6A依赖性方式调控EP300,进而介导代谢重编程的表观遗传学机制。方法:通过外源性添加乳酸钠处理TNBC细胞,采用CCK-8、集落形成、划痕愈合和Transwell实验检测细胞增殖与迁移能力;利用shRNA慢病毒载体构建IGF2BP3稳定敲低细胞模型,结合Western blot分析组蛋白乳酸化修饰水平;进一步通过RIP-seq、MeRIP-seq筛选IGF2BP3的m6A靶基因,并利用qRT-PCR和Western blot验证关键分子表达。结果:乳酸钠处理显著增强了TNBC细胞的增殖和迁移能力,且泛乳酸化水平随乳酸浓度梯度升高而增加。IGF2BP3敲低可降低组蛋白乳酸化修饰水平。通过整合RIP-seq和MeRIP-seq数据,鉴定出699个其转录本同时被IGF2BP3特异性结合且携带m6A修饰的候选基因,这些基因显著富集于表观遗传调控和代谢相关通路。EP300转录本上IGF2BP3的结合区域与m6A修饰位点高度重合,且EP300的表达水平在IGF2BP3敲低后明显下调。结论:外源性乳酸通过泛乳酸化修饰促进TNBC的恶性进展。IGF2BP3通过m6A依赖性机制调控EP300的表达,进而介导组蛋白乳酸化修饰与代谢重编程的协同作用,最终驱动TNBC的肿瘤进展。上述发现为靶向代谢-表观遗传交互调控的新型治疗策略提供了理论依据。

【Abstract】 Objective:To investigate the functional impact of lactate on triple-negative breast cancer(TNBC)malignancy and elucidate an m6A-dependent epigenetic mechanism through which insulin-like growth factor 2 mRNA-binding protein 3(IGF2BP3)orchestrates metabolic reprogramming via regulation of EP300. Methods:TNBC cells were treated with exogenous sodium lactate supplementation to investigate their oncogenic effects. Cell proliferation and migration were assessed via CCK-8,colony formation,wound healing,and Transwell assays. Stable IGF2BP3-knockdown cell models were established using shRNA lentiviral vectors,with histone lactylation modification levels analyzed by Western blot. RNA immunoprecipitation sequencing(RIP-seq)and m6A-specific methylated RNA immunoprecipitation sequencing(MeRIP-seq)were used to identify IGF2BP3’s m6A target genes,validated by qRTPCR and Western blot for key molecule expression. Results:Sodium lactate treatment significantly enhanced TNBC cell proliferation and migration,with pan-lactylation levels increasing dose-dependently. IGF2BP3 knockdown reduced histone lactylation. Integrated RIP-seq/MeRIP-seq analysis identified 699 candidate genes whose transcripts bore both IGF2BP3-specific binding and m6A modifications,significantly enriched in epigenetic regulation and metabolic pathways. IGF2BP3-binding regions on EP300 transcripts overlapped extensively with m6A sites,and EP300 expression was markedly downregulated post-IGF2BP3 knockdown. Conclusion:Exogenous lactate drives TNBC malignant progression by orchestrating pan-lactylation modifications. IGF2BP3 regulates EP300expression through m6A-dependent mechanisms,mediating the synergistic interplay between histone lactylation and metabolic reprogramming to drive TNBC progression. These findings provide a theoretical basis for novel therapeutic strategies targeting metabolism-epigenetics crosstalk.

【关键词】 三阴性乳腺癌; 乳酸; IGF2BP3; EP300;
【Key words】 TNBC; lactate; IGF2BP3; EP300;
【基金】 江苏省科技重大专项(BG2024026)
  • 【文献出处】 南京医科大学学报(自然科学版) ,Journal of Nanjing Medical University(Natural Sciences) , 编辑部邮箱 ,2025年07期
  • 【分类号】R737.9
  • 【下载频次】127
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