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藏公鸡MC1R基因多态性与羽色表型的关系
Relationship between MC1R gene polymorphism and plumage color phenotype in Tibetan roosters
【摘要】 以羽色表型特征显著的成年藏公鸡(藏黑色、藏花色和藏灰色)为研究对象,开展黑素皮质素受体1(MC1R)基因编码区遗传变异位点筛查、基因型-表型关联性分析。结果表明,在藏公鸡MC1R基因编码区发现了10个SNPs位点,其中同义突变2处,位于69 bp(C/T)和636 bp(A/G)位点,非同义突变8处,位于178 bp(A/G)、212 bp(C/T)、213 bp(A/G)、274 bp(A/G)、376 bp(A/G)、398 bp(C/T)、427 bp(A/G)、637 bp(C/T)位点。基因型分布显示,藏黑色公鸡全部表现为AA基因型(100.00%),藏灰色公鸡中AA基因型占比60.00%,而藏花色公鸡则以AG基因型为主(80.00%),表明A等位基因可能与黑羽表型的形成相关。基于10个SNPs位点构建了13个单倍型,单倍型Hap_2、Hap_10和Hap_13在藏花色公鸡中呈现独享现象。根据卡方独立性检验结果发现,69 bp(C/T)、274 bp(A/G)位点的基因型均与羽色表型呈极显著关联性(P<0.001),表明这2个位点可能是调控藏公鸡羽色变异的关键遗传标记。
【Abstract】 Adult Tibetan roosters with distinct plumage color phenotypes(Tibetan black,Tibetan variegated,and Tibetan gray)were selected to screen genetic variation sites in the coding region of the melanocortin 1 receptor(MC1R)gene and analyze genotype-phenotype correlations. The results showed that 10 SNPs were identified in the coding region of the MC1R gene in Tibetan roosters,including 2 synonymous mutations at 69 bp(C/T)and 636 bp(A/G),and 8 non-synonymous mutations at 178 bp(A/G),212 bp(C/T),213 bp(A/G),274 bp(A/G),376 bp(A/G),398 bp(C/T),427 bp(A/G),and 637 bp(C/T). Genotype distribution revealed that all Tibetan black roosters exhibited the AA genotype(100.00%),60.00% of Tibetan gray roosters carried the AA genotype,while Tibetan variegated roosters predominantly had the AG genotype(80.00%),suggesting that the A allele might be associated with the formation of the black plumage phenotype. Thirteen haplotypes were constructed based on the 10 SNPs,with haplotypes Hap_2,Hap_10,and Hap_13 exclusively observed in Tibetan variegated roosters. Chi-square independence tests indicated that genotypes at 69 bp(C/T)and 274 bp(A/G)were significantly associated with plumage color phenotypes(P<0.001),suggesting these two loci might serve as key genetic markers regulating plumage color variation in Tibetan roosters.
【Key words】 Tibetan rooster; melanocortin 1 receptor(MC1R)gene; gene polymorphism; plumage color phenotype;
- 【文献出处】 湖北农业科学 ,Hubei Agricultural Sciences , 编辑部邮箱 ,2025年05期
- 【分类号】S831.2
- 【下载频次】17