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禽腺病毒DAdV-3和FAdV-4双重荧光定量PCR检测方法的建立及应用

Establishment and application of a duplex fluorescence quantitative PCR for detection of DAdV-3 and FAdV-4

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【作者】 周珈羽朱春华陈珍程龙飞陈翠腾傅光华万春和施少华梁齐章陈红梅傅秋玲刘荣昌黄小红黄瑜

【Author】 ZHOU Jiayu;ZHU Chunhua;CHEN Zhen;CHENG Longfei;CHEN Cuiteng;FU Guanghua;WAN Chunhe;SHI Shaohua;LIANG Qizhang;CHEN Hongmei;FU Qiuling;LIU Rongchang;HUANG Xiaohong;HUANG Yu;Fujian Key Laboratory of Traditional Chinese Veterinary Medicine and Animal Health,College of Animal Science,Fujian Agriculture and Forestry University;Institute of Animal Husbandry and Veterinary Medicine,Fujian Academy of Agricultural Sciences;

【通讯作者】 黄小红;黄瑜;

【机构】 福建农林大学动物科学学院福建省兽医中药与动物保健重点实验室福建省农业科学院畜牧兽医研究所

【摘要】 禽腺病毒属成员鸭腺病毒3型(duck adenovirus type 3,DAdV-3)和禽腺病毒4型(fowl adenovirus serotype-4,FAdV-4)是养殖场主要流行的病原,对养禽业造成巨大的经济损失。目前尚未见可同时快速检测这2种病原的双重荧光定量PCR检测方法,本研究基于DAdV-3 GDMM10毒株和FAdV-4 GDMZ毒株Fiber2基因序列比对及遗传进化分析,分别在Fiber2基因保守区设计特异性引物,建立了能同时鉴别临床上常见的DAdV-3和FAdV-4双重荧光定量PCR检测方法。结果表明,DAdV-3 GDMM10和FAdV-4 GDMZ Fiber2基因处于两个不同进化分支上,同源性为46.10%。建立的检测DAdV-3和FAdV-4双重荧光定量PCR方法特异性强、灵敏度高,最低可检出45拷贝/μL的DAdV-3样品和17拷贝/μL的FAdV-4样品;且检测结果可直接通过Tm值差异进行判定,简化操作时间。利用该双重荧光定量PCR方法对2022年度临床上采集的34份肝炎-心包积液疑似样品进行检测,DAdV-3和FAdV-4检出率分别为17.65%和2.94%。为进一步开展禽源DAdV-3和FAdV-4的分子流行病学及共感染致病机制奠定了基础。

【Abstract】 Duck adenovirus type 3(DAdV-3) and fowl adenovirus serotype 4(FAdV-4),members of the genus Aviadenovirus,are the main prevalent pathogens in poultry farms, causing huge economic losses to the poultry industry.Till date, there is no duplex fluorescence real-time quantitative PCR assay that can rapid and simultaneously detect these two pathogens.Based on the homologous sequences alignment and genetic evolution analysis of DAdV-3 and FAdV-4 fiber2 genes, two pairs of specific primers were designed in the conservative regions of fiber2 genes from DAdV-3 GDMM10 and FAdV-4 GDMZ strains, respectively, and a duplex fluorescence real-time quantitative PCR assay for simultaneous detection of DAdV-3 and FAdV-4 was established.The phylogenetic analysis showed that the fiber2 genes of DAdV-3 GDMM10 and FAdV-4 GDMZ strains were in two different evolutionary branches, and the homology was 46.10%.The established dual fluorescence quantitative PCR method exhibited high specificity and sensitivity for both DAdV-3and FAdV-4detection.The sensitivity of this duplex qPCR assay was 45copies/μL and 17copies/μL for DAdV-3and FAdV-4,respectively.A total of 34clinical suspected samples with hepatitises hydropericardium syndrome were collected and tested in 2022,and the positive rates of DAdV-3and FAdV-4were 17.65%and 2.94%,respectively.This study will provide a foundation for further research on the molecular epidemiology and pathogenic mechanism of DAdV-3and FAdV-4co-infections in poultry.

【基金】 福建省属公益类科研院所基本科研专项资助项目(2022R1026005,2021R10260012);福建省自然科学基金面上资助项目(2022J01466);国家现代农业产业技术体系资助项目(CARS-42)
  • 【文献出处】 中国兽医学报 ,Chinese Journal of Veterinary Science , 编辑部邮箱 ,2024年01期
  • 【分类号】S858.3
  • 【下载频次】14
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