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外泌体来源的circRNA_051778在肺腺癌性恶性胸腔积液和结核性胸腔积液中的表达及作用研究
Expression of circRNA_051778 in Lung Adenocarcinoma-Associated Malignant and Tuberculous Pleural Effusions and Its Clinical Significance
【摘要】 目的 分析circRNA_051778在肺腺癌性恶性胸腔积液(LA-MPE)和结核性胸腔积液(TPE)样本中的临床意义。方法 本研究为横断面研究。2018年10月–2019年9月间于江西省胸科医院共募集212例患者,收集患者入院第1天胸腔积液和/或血浆。使用circRNA微阵列分析LA-MPE和TPE样本中的外泌体环状RNA(circRNAs),通过微滴式数字PCR验证差异表达环状RNA(DECs)。此外,构建可能的circRNA-miRNA-mRNA网络,并进行了GO(Gene Ontology)分析和KEGG(Kyoto Encyclopedia of Genes and Genomes)通路分析,以预测DECs的功能。通过二分类逻辑回归和受试者工作特征曲线评估circRNA_051778的诊断价值。结果 circRNA_051778的表达水平在LA-MPE样本中为(3.92±0.48)拷贝数/100 ng cDNA,在TPE样本中为(21.53±2.22)拷贝数/100 ng cDNA。与TPE相比,LA-MPE样本中的circRNA_051778下调(P<0.001)。circRNA_051778的潜在靶标富集于GTPase活性正调控、细胞质、蛋白结合和癌症相关通路中。circRNA_051778与液基薄层细胞学检查(TCT)、红细胞沉降率(ESR)和结核抗体(TBA)联合检测的曲线下面积为0.98(95%置信区间:0.97~1.00),敏感性为88.0%,特异性为100.0%。结论 外泌体中的circRNA_051778在LA-MPE中下调,GO和KEGG分析结果显示其可能在癌症的发展中发挥作用,与TCT、ESR、TBA联合有望作为LA-MPE和TPE鉴别诊断标志物。
【Abstract】 Objective To investigate the expression and clinical significance of circular RNA(circRNA) 051778in lung adenocarcinoma-malignant pleural effusion(LA-MPE) and tuberculous pleural effusion(TPE). Methods This is a cross-sectional study. A total of 212 patients were recruited from the Jiangxi Chest Hospital between October 2018 and September 2019, and their pleural effusion samples and/or plasma samples were collected. The exosomal circRNA profile was sketched by circRNA microarray. Differentially expressed circRNAs(DECs) were verified by droplet digital PCR. In addition, a putative circRNA-miRNA-mRNA network was constructed, and Gene Ontology(GO) and Kyoto Encyclopedia of Genes and Genomes(KEGG) pathway analyses were performed to predict the functions of the DECs. The diagnostic value of circRNA_051778 was evaluated by binary logistic regression and receiver operating characteristic curve. Results The expression level of circRNA_051778 in the LA-MPE samples was(3.92±0.48) copies/100 ng cDNA,while that in the TPE samples was(21.53±2.22) copies/100 ng cDNA. Compared to that in the TPE samples,circRNA_051778 was significantly downregulated in the LA-MPE samples(P<0.001). The potential targets of circRNA_051778 were enriched in positive regulation of GTPase activity, cytoplasm, protein binding, and cancer-related pathways. The area under the curve(AUC) for the combined assessment of circRNA_051778 with liquid-based thin-layer cytology(TCT), erythrocyte sedimentation rate(ESR), and tuberculosis antibody(TBA) was 0.98(95% confidence interval: 0.97-1.00), with the sensitivity being 88.0% and the specificity being 100.0%. Conclusion Exosomal circRNA_051778 is downregulated in LA-MPE. According to the findings from the GO and KEGG analyses, exosomal circRNA_051778 may play a role in cancer development and has the potential to serve as a marker for differential diagnostic of LA-MPE and TPE when it is used in combination with TCT, ESR, and TBA.
【Key words】 Circular RNA; Exosome; Pleural effusion; Tuberculosis; Lung adenocarcinoma;
- 【文献出处】 四川大学学报(医学版) ,Journal of Sichuan University(Medical Sciences) , 编辑部邮箱 ,2024年05期
- 【分类号】R734.2
- 【下载频次】12