节点文献

水禽细小病毒SYBR Green Ⅰ荧光定量PCR检测方法的建立与应用

Establishment and application of a SYBR Green Ⅰ fluorescence quantitative PCR detection method for waterfowl parvoviruses

  • 推荐 CAJ下载
  • PDF下载
  • 不支持迅雷等下载工具,请取消加速工具后下载。

【作者】 汪宏才; 商雨; 马瑶; 曾哲; 张蓉蓉; 姚伦; 罗玲; 李丽; 温国元; 罗青平;

【Author】 WANG Hong-cai;SHANG Yu;MA Yao;ZENG Zhe;ZHANG Rong-rong;YAO Lun;LUO Ling;Li Li;WEN Guo-yuan;LUO Qing-ping;Institute of Animal Husbandry and Veterinary,Hubei Academy of Agricultural Sciences;Key Laboratory of Animal Bacterial Disease Prevention and Control Formulations of the Ministry of Agriculture and Rural Affairs,Hubei Academy of Agricultural Sciences;Hubei Key Laboratory of Pathogenic Microbiology of Livestock and Poultry,Hubei Academy of Agricultural Sciences;Hubei Hongshan Laboratory;

【通讯作者】 温国元;罗青平;

【机构】 湖北省农业科学院,畜牧兽医研究所; 湖北省农业科学院,农业农村部畜禽细菌病防治制剂创制重点实验室; 湖北省农业科学院,畜禽病原微生物学湖北重点实验室; 湖北洪山实验室;

【摘要】 为了建立水禽细小病毒(WPV)快速检测方法,根据序列比对结果在水禽细小病毒NS基因SF3保守区域内设计特异性引物,建立SYBR Green Ⅰ荧光定量PCR通用检测方法。该方法的扩增效率(E)为90.0%,相关系数(R~2)=0.99,标准曲线方程为y=-3.607x+38.77;除WPV出现S形扩增曲线外,新城疫病毒(NDV)、H9亚型禽流感病毒(H9 AIV)、鸭坦布苏病毒(DTMUV)、鸭肝炎病毒(DHAV)、鸭肠炎病毒(DEV)、鸭呼肠孤病毒(DRV)样品均未出现S形阳性扩增曲线;批内变异系数(CV)为0.15%~0.23%,批间变异系数为0.09%~0.28%。结果表明,SYBR Green Ⅰ荧光定量PCR检测方法重复性好、灵敏度高和特异性强。临床样品检测结果表明,SYBR Green Ⅰ荧光定量PCR与普通PCR的符合率达98.4%,灵敏度是普通PCR的1 000倍。SYBR Green Ⅰ荧光定量PCR检测方法不仅能定性检测WPV,还可以进行定量检测,可用于种鸭场、种鹅场的WPV净化检测,也可用于WPV临床大量样品的快速检测。

【Abstract】 In order to establish a rapid detection method for waterfowl parvoviruses(WPV),specific primers were designed within the conserved SF3 region of the NS gene of waterfowl parvoviruses based on sequence alignment results,and a SYBR Green Ⅰ fluorescence quantitative PCR universal detection method was established. The amplification efficiency(E)of this method was 90.0%,the correlation coefficient(R~2)was 0.99,and the standard curve equation was y=-3.607x+38.77;except for WPV with an S-shaped amplification curve,the newcastle disease virus(NDV),H9 subtype avian influenza virus(H9 AIV),duck tembusu virus(DTMUV),duck hepatitis A virus(DHAV),duck enteritis virus(DEV),and duck reovirus(DRV)samples did not show an S-shaped positive amplification curve;the coefficient of variation(CV)within a batch was 0.15% to 0.23%,and the coefficient of variation between batches was0.09% to 0.28%. The results indicated that the SYBR Green Ⅰ fluorescence quantitative PCR detection method had good repeatability,high sensitivity,and strong specificity. The clinical sample testing results showed that the coincidence rate between SYBR Green Ⅰ fluorescence quantitative PCR and conventional PCR was 98.4%,and the sensitivity was 1 000 times higher than that of conventional PCR. The SYBR Green Ⅰ fluorescence quantitative PCR detection method could not only qualitatively detect WPV,but also quantitatively detect it. It could be used for WPV purification detection in duck and goose breeding farms,as well as for rapid detection of WPV in large clinical samples.

【基金】 湖北省产业链项目(2022HSZD005);湖北省农业科技创新中心项目(2021-620-000-001-17)
  • 【文献出处】 湖北农业科学 ,Hubei Agricultural Sciences , 编辑部邮箱 ,2024年06期
  • 【分类号】S852.65
  • 【下载频次】56
节点文献中: 

本文链接的文献网络图示:

本文的引文网络