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牛流行热病毒云南流行毒株G基因遗传多样性分析

Analysis of the Genetic Diversity of Bovine ephemeral fever virus G Gene in Yunnan Province of China

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【作者】 彭海芬王国君段新慧刘丽仙杨莎莎张以芳李文贵

【Author】 PENG Haifen;WANG Guojun;DUAN Xinhui;LIU Lixian;YANG Shasha;ZHANG Yifang;LI Wengui;College of Veterinary Medicine, Yunnan Agricultural University;Lancang Vocational High Schools;Faculty of Animal Science and Technology,Yunnan Agricultural University;Yunnan Vocational College of Agriculture;

【通讯作者】 李文贵;

【机构】 云南农业大学动物医学院澜沧县职业高级中学云南农业大学动物科学技术院云南农业职业技术学院

【摘要】 为调查云南大理州一处奶牛养殖小区BEFV的感染情况及其流行毒株G基因的遗传多样性。对该大理州奶牛养殖小区的10份疑似病例,参考GenBank中牛流行热病毒的G基因序列,设计并合成2对特异性扩增G基因,测序并完成序列分析。同时,采60份血清样本进行抗体检测。结果显示,对10份疑似BEF病牛全血样的检测结果,6份呈BEFV核酸阳性。去除重复序列,获得4株牛流行热病毒云南流行株G基因扩增、测序,序列全长均为1 872 bp,编码623 aa。4株毒株之间组内核苷酸序列相似性为99.7%~99.9%,遗传进化分析与亚洲毒株聚为一类,并独自为一个细小分支。与泰国2017年分离TH-NP0065毒株和中国的毒株关系最近。与我国疫苗株JB76H的氨基酸同源性比较,发现7个氨基酸突变位点,为K53→N53、K62→R62、P183→S183、G263→E263、K461→E461、K457→R457、I475→M475。除中和抗原位点G1外,G2、G3、G4均出现变异位点。抗体检测试剂盒检测结果,抗体浓度≥52.5 ng/L临界值的样品有19份,阳性率为31.67%。综上所述,该奶牛养殖小区存在BEFV的感染,且流行株G基因存在多位点变异。

【Abstract】 To investigate the infection of BEFV and the genetic diversity of its prevalent strain G gene in a dairy farming community in Dali Prefecture, Yunnan Province.It designed and synthesized two pairs of specific amplified G genes for 10 suspected cases in dairy cattle breeding community of Dali Prefecture, with reference to the G gene sequence of bovine ephemeral fever virus in GenBank, sequenced and completed sequence analysis.At the same time, 60 serum samples were collected for antibody detection.The results showed that 6 out of 10 whole blood samples of cattle suspected of BEF were positive for BEFV nucleic acid.The G gene of four bovine ephemeral fever virus Yunnan epidemic strains was amplified and sequenced by removing the repetitive sequence.The total sequence length was 1 872 bp, encoding 623 aa.The nucleotide sequence homology among the four strains was 99.7%—99.9%.Phylogenetic analysis showed that the four strains were grouped together with Asian strains and were a small branch alone.It had the closest relationship with TH-NP0065 strain isolated from Thailand in 2017 and Chinese strain.Compared with the amino acid homology of the vaccine strain JB76H in China, seven amino acid mutation sites were found: K53 → N53,K62 → R62,P183 → S183,G263 → E263,K461 → E461,K457 → R457,I475 → M475.Except the neutralizing antigen site G1,mutation sites were present in G2,G3 and G4.According to the results of antibody test kit, 19 samples with antibody concentration≥52.5 ng/L critical value were found, with a positive rate of 31.67%.In conclusion, BEFV infection was present in this dairy farming community and there were multi-locus variants in the G gene of the prevalent strain.

【基金】 云南省科技厅创新引导与科技型企业培育计划(202204BI090001)
  • 【文献出处】 华北农学报 ,Acta Agriculturae Boreali-Sinica , 编辑部邮箱 ,2024年S1期
  • 【分类号】S858.23
  • 【下载频次】2
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