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昆明地区DYS570微变异与Y-SNP单倍群的关联性研究

Research on the association between the DYS570 microvariant and Y-SNP haplogroup in Kunming

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【作者】 黄磊; 杨广森; 范豫杰; 陈雪云; 杨柱; 王炜; 何玮; 翟滇; 邓钧; 张艺严; 程宝文;

【Author】 Huang Lei;Yang Guangsen;Fan Yujie;Chen Xueyun;Yang Zhu;Wang Wei;He Wei;Zhai Dian;Deng Jun;Zhang Yiyan;Cheng Baowen;Institute of Criminal Science and Technology,Kunming Public Security Bureau;Kunming Medical University School of Forensic Medicine;Criminal Investigation Corps, Yunnan Provincial Public Security Department;

【通讯作者】 程宝文;

【机构】 昆明市公安局刑事科学技术研究所; 昆明医科大学法医学院; 云南省公安厅刑侦总队;

【摘要】 目的探究DYS570基因座微变异与Y-SNP单倍群的关联性。方法利用AIYSNP42、AIYSNP47和YfilerTM Platinum试剂盒中89个Y-SNPs和34个Y-STRs对昆明地区116例在DYS570基因座发生微变异的群体进行研究,采用Set-B二代测序试剂盒检测DYS570基因座的核心重复序列,对获得的数据通过直接计数法进行统计分析,运用Network 10.2软件绘制网络图对样本遗传信息进行可视化分析。结果111例DYS570(18.3-21.3)样本的核心重复序列为TTT[TTTC]18-21,属于O2a2b1a1a1a4-F14494亚群;1例DYS570/20.3样本的核心重复序列为[TTTC]15TTC[TTTC]5,属于O2a1b1a1a1a1e-F1365亚群;1例DYS570/17.1样本的核心重复序列为[TTTC]17T,属于O2a1b1a1a1a-F11亚群;3例DYS570/19.2样本的核心重复序列为[TTTC]3TT[TTTC]16,属于D1a1a-M15单倍群。结论DYS570基因座核心重复结构相同的微变异与单倍群存在关联,在法医学实践中可以利用微变异特征反推样本的族源。

【Abstract】 Objective To investigate the association between microvariants at locus DYS570 and Y-SNPs haplogroup.Methods 89 Y-SNPs and 34 Y-STRs in AIYSNP42,AIYSNP47 and YfilerTM Platinum kits were used to detect the genotype of 116 microvariants at locus DYS570 in Kunming,and the Set-B kit was used to detect the core repeat sequences of the DYS570 locus.The data were statistically analyzed by direct counting method.Then,a network map was drawn by Network10.2,in order to visualize the genetic information of the sample.Results The results demonstrated that 111 DYS570/18.3-21.3 samples had a core repeat sequence of TTT[TTTC]18-21,belonging to subgroup O2a2b1a1a1a4-F14494.A DYS570/20.3sample had a core repeat sequence of[TTTC]15TTC[TTTC]5,belonging to O2a1b1a1a1a1e-F1365 subgroup.A DYS570/17.1sample had a core repeat sequence of[TTTC]17 T,belonging to the O2a1b1a1a1a-F11 subgroup.Three DYS570 (19.2)samples had[TTTC]3 TT[TTTC]16,belonging to the D1a1a-M15 haplogroup.Conclusion The results indicated that the microvariant with the same core repeat structure at locus DYS570 was associated with haplogroups,and the ancestry origin of samples can be inferenced from microvariant characteristics during the practice of forensic medicine.

【关键词】 法医遗传学; Y-STRs; Y-SNP; DYS570; 微变异;
【Key words】 Forensic genetics; Y-STRs; Y-SNP; DYS570; Microvariant;
【基金】 云南省刑事科学技术重点实验室创新研究基金计划项目(YNPC-S2021003);2021年北京市现场物证检验工程技术研究中心开放课题项目(2021CSEEKFKT08)
  • 【文献出处】 中国法医学杂志 ,Chinese Journal of Forensic Medicine , 编辑部邮箱 ,2024年01期
  • 【分类号】D919.1
  • 【下载频次】23
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