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1株新型鹅星状病毒的全基因序列分析
Whole Gene Sequence Analysis of a Novel Goose Astrovirus
【摘要】 为研究新型鹅星状病毒(Novel goose astroviruses, N-GAstV)的遗传进化特征,获得了鹅星状病毒安徽分离株AstV/AHHX的全长基因,为7 251 nt。测序分析显示:AstV/AHHX具有典型的新型鹅星状病毒基因组特征。AstV/AHHX与分离株GDZJ37以及山东分离株G538和G576的遗传距离较近;同时与毒株GDZJ37、G538和G576的ORF2氨基酸序列同源性达100%,ORF1a和ORF1b的同源性也有99.6%以上,推测它们由同一毒株演化而来。ORF2氨基酸序列位点分析显示有12高变异位点,分别是第36(Y/S/H)、60(V/I)、224(T/A)、228(A/S/T)、229(P/Q)、289(T/A)、376(T/A)、456(D/E)、540(Q/L)、608(S/T)、610(E/D/G)、614(N/A/T)位氨基酸。其中第224、228、229、608、614位的氨基酸突变可能导致病毒蛋白质的构象及功能发生变化,进而改变病毒的致病能力。
【Abstract】 In order to study the genetic and evolutionary characteristics of a novel goose astrovirus(N-GAstV),the full-length genes of Anhui strain AstV/AHHX were cloned in this study, and it was 7 251 nt.Sequencing analysis showed that AstV/AHHX had typical characteristics of N-GAstV.The phylogenetic tree showed that AstV/AHHX was relatively close to GDZJ37 isolates from China, G538 and G576 isolates from Shandong Province in recent years.The homology of ORF2 with GDZJ37,G538 and G576 was 100%,and the homology of ORF1a and ORF1b was more than 99.6%.Presumably they evolved from the same strain.Amino acid sequence analysis of ORF2 revealed 12 highly variable sites.They were the amino acid sites, 36(Y/S/H),60(V/I),224(T/A),228(A/S/T),229(P/Q),289(T/A),376(T/A),456(D/E),540(Q/L),608(S/T),610(E/D/G),614(N/A/T).Amino acid mutations at position 224,228,229,608 and 614 may lead to changes in the conformation and function of viral proteins, then the pathogenic ability of the virus was altered.
【Key words】 Novel goose astroviruses; Whole gene; Sequence analysis; Tissue distribution;
- 【文献出处】 安徽农业科学 ,Journal of Anhui Agricultural Sciences , 编辑部邮箱 ,2024年16期
- 【分类号】S852.65
- 【下载频次】9