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机器学习在植物表型中的应用进展

Progresses of Machine Learning Application in Plant Phenotype Research

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【作者】 李阿蕾戴志刚陈基权邓灿辉唐蜻程超华许英张小雨粟建光杨泽茂

【Author】 LI Alei;DAI Zhigang;CHEN Jiquan;DENG Canhui;TANG Qing;CHENG Chaohua;XU Ying;ZHANG Xiaoyu;SU Jianguang;YANG Zemao;Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences;

【通讯作者】 杨泽茂;

【机构】 中国农业科学院麻类研究所

【摘要】 表型组学涵盖面广、涉及理化性质多,数据有多态性、时效性、数据量大和高维度、高复杂性、高度不确定性的特征。机器学习作为人工智能的重要组成部分,是近年高通量方面的研究热点。植物表型研究与机器学习有效结合不仅可以扩大表型数据量级,还可以挖掘从分子、组织、个体到群体的所有层次植物表型,促进植物研究快速发展。研究以机器学习分类和机器学习在植物表型研究中的应用为出发点,介绍机器学习基本流程,比较众多机器学习算法应用的优缺点,概述国内外最新机器学习在表型组学中的研究热点,探讨植物表型与机器学习未来发展趋势。

【Abstract】 Phenomics cover a wide range of physical and chemical properties, the data with characteristics of variety, velocity, volume and high dimension, high complexity, high uncertainty. As an important part of artificial intelligence, machine learning is a hot topic in high throughput research in recent years. The effective combination of plant phenotype research and machine learning can not only expand the magnitude of phenotypic data, but also mine plant phenotypic data at all levels, from molecules, tissues, individuals to groups, promoting the rapid development of plant technology. This article starts from the classification of machine learning and its application in plant phenotype research, describes the basic process of machine learning, compares the advantages and disadvantages of various machine learning algorithms, summarizes the latest hot research in machine learning and phenotypes at home and abroad, and discusses the future development trend of plant phenotyping and machine learning.

【基金】 国家自然科学基金青年项目(31601351);湖南省自然科学基金面上项目(2022JJ30650);现代农业产业技术体系建设专项(CARS-16-E01);中国农业科学院创新工程(CAAS-ASTIP-2017-IBFC01)
  • 【文献出处】 中国麻业科学 ,Plant Fiber Sciences in China , 编辑部邮箱 ,2023年05期
  • 【分类号】S126;TP181
  • 【下载频次】75
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