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凌云白毫茶遗传多样性分析及分子指纹构建
Genetic diversity analysis and fingerprinting construction of Camellia sinensis cv. Lingyun-baihaocha tea plants
【摘要】 [目的]了解凌云白毫茶群体的遗传多样性及其之间的亲缘关系,为凌云白毫茶树品种的鉴定、遗传改良等提供参考。[方法]采集25个凌云白毫茶群体共150个个体并提取其基因组DNA,利用4个SSR及4个InDel分子标记结合高通量毛细管电泳进行多态性位点检测,统计条带并分析遗传多样性及构建分子指纹图谱。[结果]凌云白毫茶群体经8对引物扩增后共检测出98个等位基因,引物扩增出来的等位基因为7~17个,平均为12.25个;有效等位基因数(Ne)为1.139~3.290,均值为2.077。在群体水平上,凌云白毫茶群体表现出较低的遗传多样性,Ne介于1.048~3.502之间,观测杂合度(Ho)介于0.000~0.271之间,期望杂合度(He)介于0.035~0.573之间,香农信息指数(I)介于0.056~1.181之间。[结论]明确了25个凌云白毫茶群体相互之间的亲缘关系,并构建了各自特异的分子指纹代码,为凌云白毫茶种质资源保护及品种选育提供了依据。
【Abstract】 [Purpose] A better understanding of the genetic diversity and relationship of Lingyun-baihaocha tea populations will provide a reference for the identification and genetic improvement of Lingyun-baihaocha tea varieties. [Method] Four simple sequence repeats(SSRs) and 4 insertion/deletion(InDel) markers were used to analyze the genetic diversity and construct the molecular fingerprinting of 150 individuals from 25 Lingyun-baihaocha tea populations. [Result] Ninety-eight alleles were detected by 8 pairs of primers. The number of alleles amplified by each primer pair ranged from 7 to 17(average 12.25), with the number of effective alleles(Ne) fluctuating between 1.139 and 3.290(average 2.077). The Lingyun-baihaocha tea plants showed a relatively low genetic diversity at the population level considering the Ne of 1.048-3.502, the observed heterozygosity(Ho) of 0.000-0.271, the expected heterozygosity(He) of 0.035-0.573 and the Shannon′s information index(I) of 0.056-1.181. [Conclusion] Illuminations on the genetic diversity and molecular fingerprinting of 25 Lingyun-baihaocha tea populations provided a theoretical basis for the protection of Lingyun-baihaocha tea germplasm and breeding of elite cultivars.
【Key words】 Lingyun-baihaocha tea; molecular marker; genetic diversity; fingerprinting;
- 【文献出处】 亚热带农业研究 ,Subtropical Agriculture Research , 编辑部邮箱 ,2022年03期
- 【分类号】S571.1
- 【下载频次】15