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鸭腺病毒3型MGB TaqMan探针实时荧光定量PCR检测方法的建立

Establishment of a MGB TaqMan Probe-based Real-time Quantitative PCR Detection Method for Duck(Anas platyrhynchos domestica) Adenovirus Type 3

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【作者】 陈翠腾陈珍朱春华蔡国漳刘斌琼黄瑜

【Author】 CHEN Cui-Teng;CHEN Zhen;ZHU Chun-Hua;CAI Guo-Zhang;LIU Bing-Qiong;HUANG Yu;Institute of Animal Husbandry & Veterinary Medicine, Fujian Academy of Agricultural Sciences;

【通讯作者】 黄瑜;

【机构】 福建省农业科学院畜牧兽医研究所

【摘要】 鸭(Anas platyrhynchos domestica)腺病毒3型(Duck adenovirus type 3, DAdV-3)是近年来我国新发现的鸭源腺病毒。本研究根据NCBI数据库中DAdV-3代表株(CH-GD-12-2014株, GenBank No. KR135164)的22K基因特征,设计特异性引物和探针,建立检测DAdV-3的MGB TaqMan探针qRT-PCR方法。结果表明,建立的qRT-PCR方法具有如下特性:灵敏度高,最低检测限为55拷贝/μL;特异性强,和鸭群常见传染病病原均无交叉反应;重复性好,组内和组间重复实验变异系数分别为0.44%~2.10%和0.64%~2.37%。利用建立的qRT-PCR方法对临床送检的61份鸭源病料进行检测,检出DAdV-3阳性15份,阳性率为24.6%。本研究为后续开展DAdV-3感染的实验室快速诊断和流行病学调查奠定了初步基础。

【Abstract】 Duck(Anas platyrhynchos domestica) adenovirus type 3(DAdV-3) is a newly discovered duckderived adenovirus in recent years. In this study, specific primers and probe were designed based on the 22 K gene characteristics of DAdV-3 representative strain(CH-GD-12-2014 strain, GenBank No. KR135164) in the NCBI database, and a MGB TaqMan probe real-time quantitative PCR method for detecting DAdV-3 was established. The results showed that the established q RT-PCR method had the following characteristics: High sensitivity, minimum detection limit of 55 copies/μL; Strong specificity, and no cross-reaction with common infectious disease pathogens in duck flocks; Good reproducibility, intra-group and inter-group repetitive experimental variation coefficients were 0.44%~2.10% and 0.64%~2.37%, respectively. 61 duck-derived materials were detected by the established method, and 15 positive DAdV-3 samples were detected with a positive rate of 24.6%. This study laid the foundation for rapid laboratory diagnosis and epidemiological investigation of DAdV-3 infection.

【基金】 现代农业产业体系建设专项资金(CARS-42);福建省属公益类科研院所基本科研专项(No.2017R1023-6和No.2016R1022-9);福建省财政专项(No.FJFS-2017)
  • 【文献出处】 农业生物技术学报 ,Journal of Agricultural Biotechnology , 编辑部邮箱 ,2019年03期
  • 【分类号】S852.65
  • 【被引频次】5
  • 【下载频次】396
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