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内蒙古鄂温克族人群30个InDel位点遗传多态性

Genetic Polymorphisms of 30 InDel Loci in Ewenki Ethnic Group from Inner Mongolia

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【作者】 靳小业魏媛媛贺永锋郭瑜鑫梅婷孟昊天张玉党孔婷婷朱波峰

【Author】 JIN Xiao-ye;WEI Yuan-yuan;HE Yong-feng;GUO Yu-xin;MEI Ting;MENG Hao-tian;ZHANG Yu-dang;KONG Ting-ting;ZHU Bo-feng;Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi′an Jiaotong University;Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi′an Jiaotong University;Research Center of Stomatology, Stomatological Hospital, Xi′an Jiaotong University;Department of Criminal Investigation, Shaanxi Provincial Public Security Bureau;Department of Biochemistry, Preclinical Medicine College, Xinjiang Medical University;Institute of Forensic Science of Anhui Public Security Department;

【机构】 西安交通大学口腔医学院陕西省颅颌面精准医学研究重点实验室西安交通大学口腔医学院陕西省牙颌疾病临床医学研究中心西安交通大学口腔医院口腔医学研究中心陕西省公安厅刑事侦查局新疆医科大学基础医学院生物化学与分子生物学教研室安徽省公安厅物证鉴定中心

【摘要】 目的研究30个插入/缺失(insertion/deletion,InDel)位点在内蒙古地区鄂温克族人群中的遗传多态性,并评估其在法医学中的应用价值。方法采集87名鄂温克族健康无关个体的外周血样,提取基因组DNA,对样本的30个InDel位点进行复合扩增并分型,运用优化的Power Stats v1.2软件对各位点进行HardyWeinberg平衡检验及遗传学参数的计算,并采用SNPAnalyzer v2.0软件检验各位点间是否存在连锁不平衡。基于30个InDel位点的等位基因频率进行分子方差分析、主成分分析、系统发育树的构建,探讨鄂温克族与其他群体的关系。结果 30个InDel位点经校正检验后符合Hardy-Weinberg平衡定律。经Bonferroni法校正后,两两配对的InDel位点之间处于连锁平衡状态。群体遗传学研究结果表明,鄂温克族与河南汉族和北京汉族的遗传关系较近,与欧洲和墨西哥地区的族群较远。结论 30个InDel位点在内蒙古鄂温克族人群中具有相对较好的遗传多态性,可作为STR检测体系的有益补充。

【Abstract】 Objective To study the genetic polymorphisms of 30 insertion/deletion(InDel) loci and evaluate their forensic application in Ewenki ethnic group from Inner Mongolia. Methods Peripheral blood samples were collected from 87 unrelated healthy individuals in Ewenki ethnic group. Genomic DNA were extracted,and 30 InDel loci of the samples were multiplex amplified and genotyped. Hardy-Weinberg balance tests were preformed for all loci and genetic parameters were calculated by modified Power Stats v1.2 software.The linkage disequilibrium between loci were tested by SNPAnalyzer v2.0 software. Based on the allele frequencies of 30 InDel loci, the genetic relationships between Ewenki ethnic group and other populations were evaluated by analysis of molecular variance, principal component analysis and phylogenetic reconstruction. Results After correction, 30 InDel loci conformed to Hardy-Weinberg equilibrium. It was found that the pairwise InDel loci were in linkage equilibrium after Bonferroni correction. The results of population genetics indicated that Ewenki ethnic group had close genetic relationships with Henan Han and Beijing Han populations; whereas it was significantly different from several populations in Europe and Mexico. Conclusion There are relatively high genetic polymorphisms on 30 InDel loci of Ewenki ethnic group from Inner Mongolia, which can be used as a helpful supplement application for STR detection system.

  • 【文献出处】 法医学杂志 ,Journal of Forensic Medicine , 编辑部邮箱 ,2017年03期
  • 【分类号】D919.1
  • 【被引频次】8
  • 【下载频次】199
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