节点文献

大豆再生相关基因GmBIN2的克隆及生物信息学分析

Cloning and Bioinformatics Analysis of Regeneration Related Gene GmBIN2 in Soybean

  • 推荐 CAJ下载
  • PDF下载
  • 不支持迅雷等下载工具,请取消加速工具后下载。

【作者】 王玲爽衣春生李思楠张超马彦龙金杨媚李文滨武小霞苏安玉

【Author】 Wang Lingshuang;Yi Chunsheng;Li Sinan;Zhang Chao;Ma Yanlong;Jin Yangmei;Li Wenbin;Wu Xiaoxia;Su Anyu;Key Laboratory of Soybean Biology in Chinese Ministry of Education/Agricultural Ministry’s Northeast Areal Key Laboratory of Soybean Biology and Genetic Breeding,College of Agriculture,Northeast Agricultural University;College of Resources and Environment,Northeast Agricultural University;

【机构】 东北农业大学农学院大豆生物学教育部重点实验室/农业部东北大豆生物学与遗传育种重点实验室东北农业大学资源与环境学院

【摘要】 根据前期实验获得的大豆Gm BIN2基因登录号,从大豆中克隆Gm BIN2基因的全长CDS序列,得到大豆Gm BIN2基因。对大豆再生相关基因Gm BIN2的启动子序列、氨基酸序列、编码的蛋白质结构、亲疏水性以及同源进化树进行分析,结果表明,大豆再生相关基因Gm BIN2编码区c DNA长度为1 125 bp,编码374个氨基酸,Gm BIN2编码的蛋白为亲水性蛋白;分析其蛋白功能结构域发现,Gm BIN2蛋白具有丝氨酸/苏氨酸激酶催化域,为PKc-like超家族成员;构建系统进化树发现其与野生大豆亲缘较近。本研究的实验结果有利于更加深入的研究Gm BIN2基因在大豆再生过程中的关键作用,为提高大豆再生效率提供依据。

【Abstract】 Based on the Genbank number of soybean gene Gm BIN2 obtained from previous experiment, we got Gm BIN2 gene by cloning the full-length CDS sequences of Gm BIN2 gene from soybean. We analyzed the promoter sequences, amino acid sequences, coding protein structure, hydrophilicity, hydrophobicity and homologous evolutionary tree of soybean regeneration-related gene Gm BIN2, and the results showed that the length of c DNA from soybean regeneration-related gene Gm BIN2 was 1 125 bp, encoded 374 amino acids and the protein encoded by Gm BIN2 was hydrophilic protein. After analyzing its protein functional domain, we found that Gm BIN2 protein had Serine/Threonine protein kinase catalytic domain, and it belonged to PKc-like superfamily. After constructing phylogenetic tree, we found that it had a close relationship with wild soybean plants. The results of this study would help to further study the pivotal role of Gm BIN2 in soybean regeneration process and provide a basis for improving the soybean regeneration rate.

【关键词】 大豆再生GmBIN2生物信息学
【Key words】 SoybeanRegenerationGmBIN2Bioinformatics
【基金】 哈尔滨市优秀学科带头人项目-优质高蛋白大豆新品种选育及推广应用(2015RQXXJ018);转基因重大专项(2013ZX08004-001);黑龙江省教育厅重点项目(12531z001)共同资助
  • 【文献出处】 基因组学与应用生物学 ,Genomics and Applied Biology , 编辑部邮箱 ,2016年02期
  • 【分类号】S565.1
  • 【被引频次】9
  • 【下载频次】250
节点文献中: 

本文链接的文献网络图示:

本文的引文网络