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斑节对虾细胞周期蛋白Y基因克隆与原核表达
Molecular cloning and expression analysis of the cyclin Y gene from black tiger shrimp(Penaeus monodon)
【摘要】 为了研究细胞周期蛋白Y(cyclin Y)在斑节对虾(Penaeus monodon)卵巢发育中的作用,从斑节对虾转录组数据中筛选获得cyclin Y基因部分序列,采用SMART-RACE方法克隆得到斑节对虾细胞周期蛋白Y(Pm-cyclin Y)基因c DNA全序列。Pm-cyclin Y基因c DNA全长1576 bp,其中包含108 bp的5′非编码区(5′UTR)和439 bp的3′非编码区(3′UTR)以及1029 bp的开放阅读框(ORF),可编码342个氨基酸。生物信息学分析显示,其编码的氨基酸序列有1个保守的周期蛋白框(cyclin box)同源结构域(172~257 aa),预测的分子量约为37.6 k D,理论等电点6.64。实时定量PCR显示其m RNA在卵巢的表达量显著高于其他组织(P<0.05);并且在卵巢5个不同发育期都有表达,在III期卵巢中的表达量最高。本研究通过原核表达方法对Pm-cyclin Y进行重组表达,为其蛋白质功能方面的研究奠定了基础。
【Abstract】 Cyclin Y is a newly discovered cell cycle-related protein that plays an important role during embryonic development, cell cycle progression and development, and disease. Current research on cyclin Y is very active but no data have been reported on cyclin Y in crustaceans. Gonads of the black tiger shrimp, Penaeus monodon, mature if the eye stalk is removed. Thus, the full-length cyclin Y c DNA sequence from P. monodon(denoted as Pm-cyclin Y) was obtained using the rapid amplification of complementary DNA ends method to better understand the potential function of cyclin Y in the regulation of shrimp reproduction. The full-length c DNA sequence was 1578 bp and contained 108 bp 5′ untranslated region(UTR) and a 439 bp 3′UTR. The open reading frame was 1029 bp and coded 342 amino acids(aa). A bioinformatics analysis showed that the amino acid coding sequence had a conserved cyclin box and the homologous protein box structure domain was 172–257 aa. The predicted molecular weight was about 38.7 k D, and the theoretical isoelectric point was 6.64. A real-time quantitative polymerase chain reaction analysis detected significantly higher Pm-cyclin Y m RNA expression in the ovary than that in other tissues. Pm-cyclin Y m RNA was expressed in the ovary at five different developmental stages, and the expression level was highest during phase III. The study abtained recombinant expression Pm-cyclin Y in prokaryotes and offered theoretical basis for further research on Pm-cyclin protein function. These results provide a basis for further functional studies of Pm-cyclin Y.
【Key words】 Penaeus monodon; cyclin Y gene; molecular cloning; real-time PCR; prokaryotic expression;
- 【文献出处】 中国水产科学 ,Journal of Fishery Sciences of China , 编辑部邮箱 ,2015年05期
- 【分类号】S917.4
- 【被引频次】4
- 【下载频次】108