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沈阳森林动物园丹顶鹤核心种群的遗传多样性分析

Analysis of Genetic Diversity in the Red-crowned Crane Population at Shenyang Forest Zoo

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【作者】 张佳佳田秀华宋艳珠董海燕白素英张玥

【Author】 Zhang Jiajia;Tian Xiuhua;Song Yanzhu;Dong Haiyan;Bai Suying;Zhang Yue;College of Wildlife Resources,Northeast Forestry University;Shenyang Forest Zoo;

【机构】 东北林业大学野生动物资源学院沈阳森林动物园

【摘要】 利用7个SSR位点对沈阳动物园丹顶鹤核心种群进行了遗传多样性分析,统计了等位基因数(Na)、有效等位基因数(Nc),计算了群体杂合度(He)、多态信息含量(PIC)、Shannon信息指数(I)、近交系数(Fis)等参数。结果显示:7个微卫星标记中有4个高度多态位点和3个中度多态位点,共扩增出36个等位基因,并发现了11个稀有等位基因;平均有效等位基因是2.4342,平均期望杂合度为0.5510,平均多态信息含量是0.5049,遗传多样性水平较高;哈温平衡检测显示5个位点符合哈温平衡,2个位点偏离了哈温平衡;平均Fis值为0.0069,同时平均观测杂合度小于平均期望杂合度,显示可能存在种群个体亲缘关系较近的情况。

【Abstract】 We analyzed the genetic diversity of the red-crowned crane(Grus japonensis) population at Shenyang Forest Zoo by using 7 SSR loci.We counted numbers of alleles(Na)and effective numbers of alleles(Ne).and calculated polymorphism information content(PIC).Shannon information index(I) and inbreeding coefficient(Fis).There were 4 highly polymorphic loci and 3moderately polymorphic loci.36 alleles were amplified,and 11 rare alleles were found.The average Newas 2.4342.the average expected heterozygosity was 0.5510.and the average PIC was0.5049.showing higher levels of genetic diversity.Hardy- Weinberg equilibrium | HWE) testing showed that 5 SSR loci were in accord with HWE and 2 loci were not in HWE.Mean Fis was0.0069,while the average expected heterozygosity was greater than the average observed heterozygosity,indicating that there were closer relationships between some individuals.

【关键词】 丹顶鹤遗传多样性SSR
【Key words】 Red-crowned craneGenetic diversitySSR
  • 【文献出处】 野生动物学报 ,Chinese Journal of Wildlife , 编辑部邮箱 ,2015年01期
  • 【分类号】S865.3
  • 【被引频次】1
  • 【下载频次】106
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