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实时定量PCR测定苏云金芽胞杆菌质粒pBMB67的拷贝数

Determination of the Copy-number of the Resident Plasmid p BMB67 from Bacillus thuringiensis Strain YBT-1520 by Quantitative Real-time PCR

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【作者】 钟春英孙明

【Author】 ZHONG Chun-ying;SUN Ming;College of Chemistry and Life Science, Hubei University of Education/Hubei Key Laboratory of Purification and Application of Plant Anti-cancer Active Ingredients;College of Life Science and Technology, Huazhong Agricultural University/State Key Laboratory of Agricultural Microbiology;

【机构】 湖北第二师范学院化学与生命科学学院/植物抗癌活性物质提纯与应用湖北省重点实验室华中农业大学生命科学技术学院/农业微生物国家重点实验室

【摘要】 根据苏云金芽胞杆菌(Bacillus thuringiensis)YBT-1520的全基因组测序结果,在内生质粒p BMB67和染色体上分别选取单拷贝片段,利用实时荧光定量PCR法测得质粒p BMB67的拷贝数为21。此外,在内生质粒p BMB67的3个不同位点设计引物,分别以不同的靶片段作为实时荧光定量PCR的检测对象,测得p BMB67质粒的拷贝数分别为20.1、21.0和21.3,表明单拷贝靶片段的选择对测定质粒的拷贝数没有影响,进一步证明了实时荧光定量PCR测定质粒拷贝数的可行性。

【Abstract】 According to the whole genome sequence of Bacillus thuringiensis strain YBT-1520,a specific single-copy fragment was selected from the resident plasmid p BMB67 and chromosome separately. And the copy number(PCN) of p BMB67 was estimated as 21 by quantitative real-time PCR. In addition,three pairs of primers were designed at three different fragments of p BMB67 as the targets of quantitative real-time PCR detection,and the result showed that the PCN of p BMB67 was 21.3,20.1,and 21.0,respectively. This finding indicated that the difference of target fragments on plasmid for quantitative real-time PCR detection would not affect the value of PCN,and demonstrated that the quantitative real-time PCR method is reliable to determine the PCN.

【基金】 湖北省自然科学基金项目(2014CFB566)
  • 【文献出处】 湖北农业科学 ,Hubei Agricultural Sciences , 编辑部邮箱 ,2015年08期
  • 【分类号】Q782
  • 【被引频次】3
  • 【下载频次】301
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