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十种臂尾轮虫12S rDNA基因序列的PCR扩增及分析

PCR Amplication and Sequence Analysis of Partial 12S rDNA Gene From Ten Brachionus Species( Rotifera)

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【作者】 程双怀金思宇陈款民孙道琴魏世祥项贤领

【Author】 CHENG Shuang-huai;JIN Si-yu;CHEN Kuan-min;SUN Dao-qin;WEI Shi-xiang;XIANG Xian-ling;College of Lofe Sciences,Provincial Key Laboratory of Biotic Environment and Ecological Safety in Anhui,Anhui Provincial Key Lab of the Conservation and Exploitation of Biological Resources,Anhui Normal University;

【机构】 安徽师范大学生命科学学院安徽省高校生物环境与生态安全省级重点实验室重要生物资源保护和利用研究安徽省重点实验室

【摘要】 通过对角突臂尾轮虫、尾突臂尾轮虫、裂足臂尾轮虫、剪形臂尾轮虫、方形臂尾轮虫、壶状臂尾轮虫、红臂尾轮虫、镰形臂尾轮虫、萼花臂尾轮虫和十指臂尾轮虫等十种臂尾轮虫和矩形龟甲轮虫的12S rDNA基因进行扩增和序列测序,结合Genbank中两种褶皱臂尾轮虫的125rDNA序列,使用MEGA软件构建这13种轮虫系统发生树(NJ树),探讨了12种臂尾轮虫之间的系统关系.结果表明:本研究所涉及的轮虫12S rDNA序列差异百分比均值为34.41%,可作为分子标记应用于轮虫属内种间系统关系研究;系统树支持将十指臂尾轮虫、裂足臂尾轮虫归属于臂尾轮属;壶状臂尾轮虫和红臂尾轮虫是两个独立的种.

【Abstract】 Partial sequences of 12 S rDNA gene from Brachionus angularis,B. caudatus,B. diversicornis,B.forficula,B. quadridentatus,B. urceolaris,B. rubens,B. falcatus,B. calyciflorus,B. patulus and Keratella quadrata were amplified and sequenced. Combined with 12 s rDNA of B. plicatilis and B. koreanus from Genbank,phylogenetic tree were built based on neighbor-joining( NJ) method with MEGA software,aiming to reveal their phylogenetic relationships and resolve some taxonomic issues. The results showed that the percentage of divergence for 12 S rDNA gene sequences in 13 samples was averaged 34. 41%. Thus,the 12 S rDNA gene was suitable for exploring the phylogeny and evolution in rotifera. The NJ tree supported that B. patulus and B. diversicornis belong to the genus Brachionus,while B. urceolaris and B. rubens are two potential species.

【关键词】 轮虫臂尾轮属12S rDNA系统发生
【Key words】 rotiferaBrachionus12S rDNAphylogeny
【基金】 国家自然科学基金(31200324);安徽省自然科学基金(1208085QC47);国家级大学生校外实践教育基地大学生创新训练计划项目
  • 【文献出处】 安徽师范大学学报(自然科学版) ,Journal of Anhui Normal University(Natural Science) , 编辑部邮箱 ,2015年05期
  • 【分类号】Q78
  • 【下载频次】122
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