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微芯片电泳及毛细管电泳在筛查急性髓系白血病FLT3-ITD基因突变中的应用研究

Applications of Microchip Electrophoresis and Capillary Electrophoresis for Screening FLT3-ITD Gene Mutation in Acute Myeloid Leukemia

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【作者】 冷馨李玲娣李金兰黄晓军阮国瑞

【Author】 LENG Xin;LI Ling-Di;LI Jin-Lan;HUANG Xiao-Jun;RUAN G uo-Rui;Beijing Key Laboratory of Hematopoietic Stem Cell Transplantation,Peking University People’s Hospital and Institute of Hematology;

【机构】 北京大学人民医院血液病研究所造血干细胞移植治疗血液病北京市重点实验室

【摘要】 本研究旨在比较微芯片电泳及毛细管电泳在急性髓系白血病(AML)FLT3-ITD基因突变检测中的可靠性。应用PCR-微芯片电泳和PCR-毛细管电泳法同时检测214例初治AML患者DNA样本FLT3-ITD基因突变,并通过直接测序法进行序列分析。PCR-微芯片电泳结果显示,FLT3-ITD突变阴性151例,阳性58例(58/214,27.1%),可疑阳性5例(5/214,2.3%);PCR-毛细管电泳结果显示,FLT3-ITD突变阴性147例,阳性67例(67/214,31.3%)。在毛细管电泳结果为阳性的67例样本中,其中4例微芯片电泳结果为阴性,5例为可疑阳性,用直接测序法进行检测,结果均为突变阳性。这一结果揭示,PCR-毛细管电泳法用于检测FLT3-ITD突变更为准确,虽然微芯片电泳组与毛细管电泳组FLT3-ITD突变检测阳性率并无显著差异(卡方检验,P>0.05)。结论:PCR-微芯片电泳与PCR-毛细管电泳均可作为简便的FLT3-ITD基因突变筛查方法,但作为新的检测手段,PCR-毛细管电泳法准确度与测序法一致、可用,而PCR-微芯片电泳法作为诊断检测的方法,其准确度有待于改进。

【Abstract】 The purpose of the present study was to compare the reliability of microchip electrophoresis and capillary electrophoresis for screening FLT3-ITD gene mutation in acute myeloid leukemia.The FLT3-ITD mutation in the genomic DNA samples from 214 untreated AML patients were separately detected by PCR-microchip electrophoresis and PCR-capillary electrophoresis,then the DNA direct sequencing analysis was carried out.The results from PCR-microchip electrophoresis showed that there were 151 FLT3-ITD mutation negative,58 FLT3-ITD mutation positive(58/214,27.1%) and 5 FLT3-ITD mutation doubtful positive(5/214,2.3%),while the outcomes from PCR-capillary electrophoresis displayed that there were 147 FLT3-ITD mutation negative and 67 FLT3-ITD mutation positive(67/214,31.3%) without doubtful positive.In the 67 FLT3-ITD mutation positive samples detected by using PCR-capillary electrophoresis,4 samples were detected as the negative while 5 samples were measured as the doubtful positive by using PCR-microchip electrophoresis.The follow ed sequencing analysis demonstrated that the above 9 samples were all FLT3-ITD mutation positive,indicating that PCR-capillary electrophoresis was more accurate and sensitive in screening the FLT3-ITD mutation,although statistic analysis showed that there were no significant differences in the detected results between PCR-microchip electrophoresis and PCR-capillary electrophoresis groups(Pearson Chi-squared Test,P >0.05).It is concluded that both PCR-microchip electrophoresis and PCR-capillary electrophoresis were convenient and fast for screening FLT3-ITD mutation,but the accuracy of PCR-microchip electrophoresis awaits further improvement.

【基金】 北京市科委重点项目(Z111107067311070);国家重点基础研究发展计划(92013CB733701);国家自然基金项目(81170484)
  • 【文献出处】 中国实验血液学杂志 ,Journal of Experimental Hematology , 编辑部邮箱 ,2014年01期
  • 【分类号】R733.71;O658.9
  • 【被引频次】6
  • 【下载频次】220
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