节点文献

牡蛎过敏原Crag1的二级结构及其B细胞和T细胞表位分析

Analysis of the secondary structure, B cell and T cell epitopes of oyster allergen Cra g 1

  • 推荐 CAJ下载
  • PDF下载
  • 不支持迅雷等下载工具,请取消加速工具后下载。

【作者】 伍慧妍何颖许晨霞刘雪婷张俊艳王珊邹泽红陶爱林

【Author】 WU Huiyan1,2 HE Ying1,2 XU Chenxia1,2 LIU Xueting1,2 ZHANG Junyan1,2 WANG Shan1,2 ZOU Zehong1,2 TAO Ailin 1.The Second Affiliated Hospital of Guangzhou Medical University Guangzhou Allergic Reactions and Clinical Immune Key Laboratory,Guangdong Province,Guangzhou 510260,China;2.Allergy Laboratory,State Key Laboratory of Respiratory Disease,Guangdong Province,Guangzhou 510260,China

【机构】 广州医学院第二附属医院 广州市过敏反应与临床免疫重点实验室呼吸疾病国家重点实验室变态反应研究室

【摘要】 目的分析牡蛎过敏原Cra g 1的二级结构及其B、T细胞表位,为探索基于抗原表位的免疫治疗奠定基础。方法从Uniprot数据库中获得牡蛎过敏原Cra g 1的氨基酸序列,通过DNA Star Protean软件,采用Garnier-Robson方法和Chou-Fasman方法分析其二级结构;采用Kyte-Doolittle法、Karplus-Schulz法、Emini法、Jameson-Wolf法综合分析Cra g 1主要的B细胞抗原表位。使用SYFPEITHI和NetMHC-Ⅱ在线网站分析T细胞抗原表位。结果牡蛎过敏原Cra g 1的二级结构主要为α-螺旋,其B细胞表位接近覆盖Cra g 1氨基酸全序列;而T细胞优势表位位于第89~103、108~122、129~143位肽段。结论本研究分析牡蛎过敏原Cra g 1的B、T细胞优势表位,为日后Cra g 1的基础免疫学研究,如疫苗的研制、诊断试剂的制备和其抗原性改造等提供了理论依据。

【Abstract】 Objective To analyze the secondary structure and B,T cell epitopes of the oyster major allergen Cra g 1,develop the immunotherapy of oyster allergy based on antigenic epitopes.Methods The amino acid sequence of oyster major allergen Cra g 1 was acquired from Uniprot database.The secondary structure of Cra g 1 was analyzed by DNAStar-Protean software with Garnier-Robson method and Chou-Fasman method.The B cell epitopes of Cra g 1 were analyzed synthetically by Kyte-Doolittle method,Karplus-Schulz method,Emini method and Jameson-Wolf method.The T cell epitopes of Cra g 1 were analyzed by SYFPEITHI and NetMHC-Ⅱ online website.Results The analysis of secondary structure showed Cra g 1 was mainly constituted by α-spiral.B cell epitopes covered almost the whole amino acid sequence of Cra g 1.However,T cell epitopes analysis demonstrated that the regions of 89-103,108-122 and 129-143 were the dominant T cell epitopes.Conclusion This study,which analyzed the dominant B,T cell epitopes of oyster allergen Cra g 1,provides a theoretical basis for further basic immunology researches of Cra g 1,such as vaccine development,diagnosis reagents preparation,and its antigenicity modification.

【基金】 国家自然科学基金资助项目(编号30771240);国家转基因生物新品种培育重大专项项目(编号2011ZX08011-005,2009ZX08011-004B);呼吸疾病国家重点实验室(广州医学院)研究课题
  • 【文献出处】 中国医药导报 ,China Medical Herald , 编辑部邮箱 ,2013年19期
  • 【分类号】R392.1
  • 【被引频次】6
  • 【下载频次】140
节点文献中: 

本文链接的文献网络图示:

本文的引文网络