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甘薯羽状斑驳病毒实时荧光定量PCR检测方法的建立

Development of Real-time Fluorescent Quantitative PCR Assay for Detection of Sweet potato feathery mottle virus

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【作者】 王丽王振东乔奇秦艳红张德胜田雨婷王爽张立军张振臣

【Author】 WANG Li1a,WANG Zhen-dong 1b,QIAO Qi2,QIN Yan-hong2,ZHANG De-sheng2,TIAN Yu-ting2,WANG Shuang2,ZHANG Li-jun1,ZHANG Zhen-chen2*(1.a.College of Agronomy,b.College of Biological and Technology,Shenyang Agricultural University,Shenyang 11061,China;2.Institute of Plant Protection/Henan Key Laboratory of Crop Pest Control;IPM Key Laboratory in Southern Part of North China,Ministry of Agriculture,Zhengzhou 450002,China)

【机构】 沈阳农业大学农学院沈阳农业大学生物科学技术学院河南省农业科学院植物保护研究所/河南省农作物病虫害防治重点实验室/农业部华北南部作物有害生物综合治理重点实验室

【摘要】 依据甘薯羽状斑驳病毒(Sweet potato feathery mottle virus,SPFMV)外壳蛋白(CP)基因的保守区设计引物和TaqMan探针,经过对反应体系和反应条件的优化,建立了特异、灵敏、高效的SPFMV实时荧光定量PCR检测方法。试验结果表明:该方法能检测到目的病毒,标准曲线的斜率和相关系数分别为-3.307和0.998,扩增效率为100.6%。最低可检测到约5.46个拷贝的阳性质粒,灵敏度比常规PCR高2个数量级。建立的实时荧光定量PCR方法可用于田间样品的检测,为SPFMV的早期预警和流行学研究提供了技术手段。

【Abstract】 A rapid,sensitive and stable real-time RT-PCR assay was established for detecting Sweet potato feather mottle virus(SPFMV)based on primers and TaqMan probe derived from coat protein gene sequences of SPFMV.The results showed that the correlation coefficient and the slope value of the standard curves with plasmid DNA were 0.998 and-3.307,respectively.The efficiency of the PCR was 100.6%.The assay was specific allowing detection only SPFMV,the detection limit of the real-time PCR assay was 5.46 copies.Compared with conventional PCR method,the real-time fluorescent RT-PCR assay showed 100 fold higher in detection sensitivity.This real-time PCR assay reported here is useful for rapid and quantitative detection of SPFMV and epidemiological investigation.

【基金】 国家甘薯产业技术体系建设项目(CARS-11-B-07)
  • 【文献出处】 沈阳农业大学学报 ,Journal of Shenyang Agricultural University , 编辑部邮箱 ,2013年02期
  • 【分类号】S435.31
  • 【被引频次】22
  • 【下载频次】210
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