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高丹草超低氢氰酸含量ISSR特征片段的克隆及序列分析

Cloning of ISSR Characteristic Fragments Related to Super Low Hydrocyanic Acid Content in SorghumSudangrass and Sequence Analysis

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【作者】 周亚星于肖夏于卓李造哲

【Author】 ZHOU Ya-xing1,2,YU Xiao-xia3,YU Zhuo1,LI Zao-zhe4(1.College of Agronomy,Inner Mongolia Agricultural University,Hohhot 010019,China; 2.College of Agronomy,Inner Mongolia University for Nationalities,Tongliao 028043,China; 3.Key Laboratory of Crop Genomics and Genetic Improvement,Ministry of Agriculture, China Agricultural University,Beijing 100193,China;4.College of Ecology and Environmental Science,Inner Mongolia Agricultural University,Hohhot 010019,China)

【机构】 内蒙古农业大学农学院内蒙古民族大学农学院中国农业大学农业部作物遗传改良重点实验室内蒙古农业大学生态环境学院

【摘要】 为明确高丹草超低氢氰酸含量ISSR特征片段的DNA分子特征,以散穂高粱×黑壳苏丹草杂种F2的3个超低氢氰酸含量ISSR特征片段H-1、H-2、H-3和散穂高粱×白壳苏丹草杂种F2的3个超低氢氰酸含量ISSR特征片段B-1、B-2、B-3为材料,对6个不同的ISSR特征片段进行了克隆和测序分析。结果表明:克隆的特征片段H-1序列全长为1377bp,序列包含1个357bp的完整编码区(ORF),位于743~1099bp区域,共编码119个氨基酸,片段与小麦亚种蛋白b的同源性为60%。片段H-2序列全长2268bp,序列包含1个279bp的ORF,位于735~1013bp区域,共编码93个氨基酸,片段与高粱假设蛋白SORBIDRAFT05g027190同源性为63.9%,与水稻粳稻组假设蛋白OsJ07776同源性为62%。片段H-3序列全长2614bp,序列包含1个339bp的ORF,位于1024~1362bp区域,共编码113个氨基酸。片段B-1序列全长1432bp,序列包含1个300bp的ORF,位于700~999bp区域,共编码100个氨基酸。片段B-2序列全长1363bp,序列包含1个228bp的ORF,位于603~830bp区域,共编码76个氨基酸。片段B-3序列全长2751bp,序列包含1个186bp的ORF,位于2534~2719bp区域,共编码62个氨基酸。片段H-3、B-1、B-2、B-3与现有已知的植物碱基序列和氨基酸序列没有同源性,可能是与高丹草超低氢氰酸含量关系更为密切的DNA新序列。

【Abstract】 To make clear DNA molecular characteristics of ISSR characteristic fragments related to super low hydrocyanic acid content in Sorghum-Sudangrass,ISSR characteristic fragment H-1,H-2 and H-3 related to super low hydrocyanic acid content in hybrid F2 of loose spike Sorghum×black shell Sudangrass and ISSR characteristic fragment B-1,B-2 and B-3 related to super low hydrocyanic acid content in hybrid F2 of loose spike Sorghum×white shell Sudangrass were cloned and sequence was tested.The results showed that whole length of the cloned fragment H-1 was 1377bp,the sequence contained a complete coding region(ORF) of 1357bp in length,located in the 743bp~1099bp region,coding 119 amino acids,the homology of the fragment with that of wheat subspecies was 60%.Whole length of fragment H-2 was 2268bp,the sequence contained a complete coding region(ORF) of 279bp in length,located in the 735bp~1013bp region,coding 93 amino acids,the homology of the fragment with SORBIDRAFT05g027190 of sorghum was 63.9%,and the homology of the fragment with OsJ07776 of rice was 62%.Whole length of fragment H-3 was 2614bp,the sequence contained a complete coding region(ORF) of 339bp in length,located in the 1024bp~1362bp region,coding 113 amino acids.Whole length of fragment B-1 was 1432bp,the sequence contained a complete coding region(ORF) of 1300bp in length,located in the 700bp~999bp region,coding 100 amino acids.Whole length of fragment B-2 was 1363bp,the sequence contained a complete coding region(ORF) of 228bp in length,located in the 603bp~830bp region,coding 76 amino acids.Whole length of fragment B-3 was 2751bp,the sequence contained a complete coding region(ORF) of 1186bp in length,located in the 2534bp~2719bp region,coding 62 amino acids.Fragment H-3,B-1,B-2 and B-3 had no homology with known plant base sequence and amino acid sequence,they may be more closely related to super low hydrocyanic acid content of new DNA sequences.

【基金】 国家自然科学基金项目(30960262);内蒙古农业综合开发办项目(2012-97)
  • 【文献出处】 中国草地学报 ,Chinese Journal of Grassland , 编辑部邮箱 ,2012年06期
  • 【分类号】S544.9
  • 【被引频次】9
  • 【下载频次】136
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