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不同引物检测甲型H1N1流感病毒的比较研究

Study on the sensitivity of different primers at detecting nucleic acids of the influenza A H1N1 virus

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【作者】 李忠韩莹刘倜张圣洋王宇路王显军徐爱强毕振强

【Author】 LI Zhong1,HAN Yin2,LIU Ti1,ZHANG Sheng-yang1,WANG Yu-lu1,WANG Xian-jun1,XU Ai-qiang1,BI Zhen-qiang1 (1.Shandong Center for Disease Control and Prevention,Key Lab of Infectious Diseases in Shandong Province,Jinan 250014,China;2.Shandong Acv Biotechnologies Co,ltd)

【机构】 山东省疾病预防控制中心山东省传染病预防控制重点实验室山东大学预防医学研究院山东省艾克韦生物技术有限公司

【摘要】 目的筛选灵敏、特异的甲型H1N1流感病毒核酸检测方法。方法采用国家流感中心推荐的甲型流感病毒(H1N1)核酸引物和1对自行设计的引物,同时选择市售荧光定量PCR试剂盒,分别对不同浓度的流感病毒进行RT-PCR或荧光定量PCR扩增,比较其检测的灵敏度和特异性。结果荧光定量PCR检测H1N1病毒核酸的灵敏度为10-5(病毒稀释度),高于普通RT-PCR的灵敏度10-3~10-4;RT-PCR扩增甲型流感病毒(H1N1)核酸时,自行设计引物的灵敏度为10-4,高于中国CDC推荐引物的灵敏度10-3。2种引物的特异性一致。结论对于甲型(H1N1)流感病毒疑似样品的检测,荧光定量PCR是较灵敏的方法,但从成本和灵敏度两方面考虑,自行设计的引物更适合基层疾控机构采用。

【Abstract】 Objective To select an assay with high sensitivity and specificity at detecting nucleic acids of the influenza A H1N1 virus.Methods Sensitivity was analyzed using RNA extracted from a 10-fold serially diluted viral culture.Nucleic acids were amplified using fluorescence quantitative PCR and RT-PCR.Two pairs of primer were used for RT-PCR.One pair of primers was designed by the authors and the other was recommended by the Chinese Center for Disease Control and Prevention.Results Fluorescence quantitative PCR was more sensitive than RT-PCR.The detection limit of fluorescence quantitative PCR was found to be 10-5 dilution,while the detection limit of RT-PCR was 10-3 or 10-4 dilution.The detection limit of RT-PCR using the primers that the authors designed was 10-4,while that of RT-PCR using the primers designed by the Chinese Center for Disease Control and Prevention was 10-3.There was no difference in the specificity of these two pairs of primers for RT-PCR.Conclusion Fluorescence quantitative PCR was found to be the most sensitive method of detecting suspected cases of influenza A H1N1.In light of their cost and sensitivity,the primers synthesized by the authors are the most suitable.

【关键词】 甲型流感(H1N1)引物灵敏度
【Key words】 Pandemic A(H1N1) influenzaprimersensitivity
【基金】 山东省科技厅计划项目(No.2009GG10002054)
  • 【文献出处】 中国病原生物学杂志 ,Journal of Pathogen Biology , 编辑部邮箱 ,2011年04期
  • 【分类号】R440
  • 【被引频次】1
  • 【下载频次】158
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