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中国典型冻土区土壤可培养细菌多样性

Diversity of culturable bacteria in the typical frozen soil areas in China

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【作者】 李淼冯海艳杨忠芳刘长征夏学齐王诚煜江丽珍蒋宏忱

【Author】 Miao Li1,Haiyan Feng1,Zhongfang Yang1,Changzheng Liu1,3,Xueqi Xia1,Chengyu Wang1,Lizhen Jiang1,Hongchen Jiang2 1 School of the Earth Sciences and Resources,China University of Geosciences,Beijing 100083,China 2 State Key Laboratory of Biogeology and Environmental Geology,China University of Geosciences,Beijing 100083,China 3 Fifth Institute of Geological and Mineral Exploration of Qinghai Provincial Bureau of Geology and Mineral Resources,Xining 810028,China

【机构】 中国地质大学地球科学与资源学院青海省第五地质矿产勘察院生物地质与环境地质国家重点实验室中国地质大学

【摘要】 【目的】对比分析中国典型高纬度冻土区和高海拔冻土区土壤可培养细菌的多样性。【方法】采用NM、TSA、R2A 3种培养基分离培养不同冻土区土壤可培养细菌,用通用引物扩增分离的细菌16S rRNA基因,根据系统发育分析进行鉴定。【结果】从6个样品中得到冻土土壤可培养细菌的菌落数量为4.70×103-2.57×105 cfu/g(土壤干重),根据不同的菌落形态分离出144株可培养细菌。纯培养物的16S rRNA基因部分序列分析表明:我国高纬度冻土区土壤样品中的细菌分别属于Firmicutes分支(59.52%)、Gammaproteobacteria分支(38.10%)、Betaproteobacteria分支(2.38%),其中假单胞菌属(Pseudomonas)、芽胞杆菌属(Bacillus)、类芽胞杆菌属(Paenibacillus)的菌株为该区域的三大优势菌群。我国高海拔冻土区土壤样品中分离细菌属于Gammaproteobacteria分支(89.22%)、Firmicutes分支(8.82%)和Bacteroidetes分支(1.96%)。优势菌群为假单胞菌属(Pseudomonas)。【结论】我国高纬度冻土区和高海拔冻土区土壤具有较高的可培养细菌多样性;不同类型冻土区土壤可培养细菌群落组成不同。本文研究结果将为我国冻土区土壤细菌资源研究与利用提供理论依据。

【Abstract】 [Objective] The diversity of culturable bacteria in the six frozen soils from High-latitude area and High-altitude area were analyzed by using culture-dependent approaches.[Methods] Three solidified media were used to isolate culturable bacteria.Bacterial 16S rRNA genes of the isolates were PCR amplified using bacteria-universal primers,and then were sequenced.The resulting bacterial 16S rRNA gene sequences were subjected to phylogenetic analysis.[Results] The abundance of culturable bacteria ranged from 4.70×103 to 2.57×105 colony forming units(CFU) per gram of soils(dry weight).A total of 144 bacterial strains were obtained.The bacterial isolates from the High-latitude area were affiliated with three phyla(Firmicutes,Gammaproteobacteria,and Betaproteobacteria) with Pseudomonas,Bacillus,and Paenibacillus strains being dominant.The bacterial isolates from High-altitude area could be grouped into three different phyla(Gammaproteobacteria,Firmicutes,and Bacteroidetes) with Pseudomonas strains be dominant.[Conclusion] The culturable bacteria are abundant and diverse in the frozen soils of High-latitude and High-altitude areas.The results also showed that the culturable bacterial community structure varied among different research areas.Our data have implications for a better understanding of culturable bacterial community in the frozen soils in China.

【基金】 国土资源部公益性行业科研专项(200911020-01);中央高校基本科研业务费专项(2010ZY15)~~
  • 【文献出处】 微生物学报 ,Acta Microbiologica Sinica , 编辑部邮箱 ,2011年12期
  • 【分类号】S154.3
  • 【被引频次】23
  • 【下载频次】529
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